Actinidia eriantha (wild kiwifruit): 130772823
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Entry
130772823 CDS
T09464
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130772823
03036 Chromosome and associated proteins [BR:
aew03036
]
130772823
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
130772823
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
130772823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
Tex_central_region
HHH_9
HHH_3
Motif
Other DBs
NCBI-GeneID:
130772823
NCBI-ProteinID:
XP_057486695
LinkDB
All DBs
Position
3:complement(18703118..18723180)
Genome browser
AA seq
1815 aa
AA seq
DB search
MARKTTILDDKDDVEVEENERERADGGGVDDDEDEDDEEGQDEYEKDGFIVDDVDEEEQD
EEEADSDEERQKKKKRKKRESETNYVLDEDDYELLQDNNITGFHRPKLESKKFKRLKKAQ
RDTGGEHSGFSDGEEFVGSGMSGRTAEEKLKWSLFGDDEGPPLEDIAEEEEQPEEEDFGD
EDDMADFIVDEEEVDEHGAPVRRGKLNKKKPRQAPGVSSSALQEAHDIFGDVDELLRLRK
QGLTKTGKYDGSGEWRERRLEDEFEPIVLSEKYMTEKDDHIRKEDIPERMQIYEESTGPP
PTNEMSIEEESNWIYNYLMTCTIPLLSKRGTGTTQGEGEPSINKDDIMRFLEFMHVQKLD
VPFVAMYRKEECLSLLRDPEQHEADIENQNKPDQKPTIRWHKVLWAIQDLDRKWLLLQKR
KSALQSYYNKRFDEESCRIYDDTRLTLNQQLFESIGKSLKAAESEREVDDVDSKFNLHFP
SGEVGADEGRYKRPKRKSQYTICCKAGLWEVVSKFGYSSEQFGLQISLEKMRMDELEDAK
ETPEEMASNFTCATFETPQDVLKGARHMAAVEISCEPCVRKHVRSIFMDNAVVSTSPTPE
GKTAIDSFHQFAGVKWLRDKPLTRFEDAQWLLIHKAEEEKLLQVTIRLPESILDKLIANS
NDYYLSDGVSKSAQLWNEQRKMILQDAFYGFLLPSMEKEARSLLTSRAKNWLLMEYGKLL
WDKISVAPFQRKGNDVSSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVVDMLDAGYLSV
RSQNINDQQRKRNDQQRIVKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEDNPRD
VGHEMDGLSIIYGDESLAHLYENSRISLDQLSGHSGIVRRAVALGRYLQNSHAMIATLCG
PGREILSWKLCPLESFLTADEKYGIVEQVMVDVTNQVGLDVNLAIAHEWLFSPLQFISGL
GPRKAASLQRSLVRAGAIYTRKDLLTAHGLGKRVFVNAVGFLRIRRTGLAASSSQFIDLL
DDTRIHPESYVLAQELAKDVYIADVQDDDAIDDEDVMEMAIEHVREKPDLLKYFEVDEYA
KSKKWENKRETLDNIRLELIQGFQDWRRLHEEPSQDDEFYMISGETEDTLAEGRIVQATV
RRVQPQRAICVLESGLTGVLTKEDYTDDWRDDTDLSEKLHEGDIITCRIKSIQMNRYQVF
LTCGEKEMRKNCYENHRNMDPFYHEDRSSSQSQQEKAHKEKELAKKHFKPRMIVHPRFQN
ITADEAMEFLSDKDPGESIFRPSSRGPSYLTLTLKVSDGVYAHKDIVEGGKEHKDITSLL
RIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYRKFRKGTKAEVDELLRIEKSEYP
MRIVYCFGISHEHPGTFILTYIRSTNPRHEYIGLYPKGFKFRKKMFENIDRLIAYFQRHI
DDPQNESAPSIRSVAARMPMRSPATGGSSGASFGSGWGGSASDDGGWRGRGDHRNGGDGD
GHPSGLPRPDGGRGRGRGRGRGRGSYNSGRGDSTSNDKQDSDYSSQKWDAKEGDDGWSSF
PGAKVQNSPGREAFPGGWGGGGSGGGWAGSSNNDGGGGGWGSGSGSGSVGGWGSSSKNDG
GGSGGGWGSGSKNDGGGSGSGSGGGWVAAARMMVVEVVVVGVTAARMMVVEVGVVGVAAA
RMMVVEVVMVGVAAARMMVVEGVGAVVVVVVGLVAVVVVVGVALAAAAVVAVGREAMVAL
SQVISTVTLEILAGVEPRKVLCSKQLIMVDGLEAAVVGAVAGDTSILFEQPVFRFYADGL
MRAYEFCSNAPSLVK
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaaaactacaattctagacgacaaagacgatgtagaagtcgaggaaaatgag
agagaacgtgctgatggaggcggcgtcgacgatgacgaagatgaagatgacgaagaaggg
caagacgagtatgaaaaagatgggtttattgtcgatgatgttgatgaagaagaacaggat
gaggaagaggcagacagtgatgaagagaggcaaaagaagaagaaaaggaagaaaagagag
tcggagaccaattatgttcttgatgaagacgactatgagctgcttcaagataataacatc
actggctttcatcgtccaaaactcgagagcaaaaagttcaagcggctgaaaaaagctcag
agggacacgggtggggagcactctggtttttctgatggcgaggaatttgttggaagtggg
atgagtggtcgaacagctgaggagaagcttaaatggagcttgtttggtgatgacgaggga
ccaccgcttgaggatattgctgaagaggaggaacaaccagaagaagaggattttggtgac
gaggatgacatggctgattttattgtggatgaagaagaagttgatgaacatggagctcct
gtgaggcgtgggaagttgaacaagaagaagccaaggcaggcaccaggagtttcatcatct
gcactacaggaagctcatgacatatttggtgatgtagatgaactcctcaggctccgcaag
caaggtttaacaaagacgggcaagtatgatggttctggtgaatggagggaaaggaggctt
gaagatgaattcgaacccattgttctttctgagaagtatatgacagagaaggatgaccat
attaggaaggaagatataccagaaagaatgcagatatacgaggaaagcactggtccacca
ccaacaaatgaaatgagtatagaagaggagagtaactggatatataattatctcatgact
tgcacgatacctcttttaagcaagagaggtactgggacaactcaaggggagggtgagccg
tcaataaacaaggatgacattatgaggtttttggagttcatgcatgttcaaaagttagat
gttccatttgttgccatgtaccggaaggaagagtgcctgagcctacttagggacccagag
caacatgaagctgatattgagaatcagaacaaacctgaccaaaaacctaccatacggtgg
cacaaggtactttgggctattcaagacttggacagaaagtggctgcttctccagaagcga
aagagtgctctccaatcatactacaataagcgatttgacgaagagtcgtgcagaatatat
gatgatacacgacttactttgaatcagcagctctttgaatccattggaaagtccctcaag
gctgctgaatccgaaagagaggttgatgatgttgactcgaagtttaacttgcacttcccc
tcgggtgaggttggtgcggatgaaggacgatataagaggcccaagagaaaatcacaatat
actatttgctgtaaagctggtctatgggaggttgtgagcaagtttggctatagttctgag
cagtttgggttgcagatatctttggaaaagatgagaatggatgaattggaggatgcgaag
gaaaccccagaggagatggcttcaaatttcacatgtgcaacgtttgaaacacctcaagat
gtgctgaaaggtgccaggcacatggcagcagtagagataagttgtgaaccatgtgttcgg
aagcatgtgcgtagtatcttcatggataatgctgttgtttcaacaagtccgactcctgag
ggtaaaacggcaatagactctttccaccagtttgcaggggtaaagtggttaagggataag
ccactaacaagatttgaggatgcacaatggcttcttattcacaaggctgaagaagagaag
cttcttcaagtgaccattaggctgccagagagtatattagataagttaattgcaaattct
aatgattattatctcagtgatggtgtgagtaaatctgctcaattatggaatgagcagagg
aagatgatactgcaggatgccttttatggttttctactaccttcaatggagaaggaagca
agatcattgttgaccagtagagcgaaaaattggttgctgatggaatatgggaagcttttg
tgggacaaaatctctgtggctccatttcaacgaaagggaaatgatgttagctcagatgaa
gaagctgcgccgagggttatggcatgctgttggggccctggaaagcctgcaacaactttt
gtgatgttggattcatctggagaagtggtggatatgctggatgctgggtatcttagtgtc
cggtctcagaatattaatgaccagcagcgcaagaggaatgatcagcaacgcattgtgaag
ttcatgacagatcatcaaccgcatgttgtagttctaggtgctgtaaatctctcctgtact
cggctgaaggatgatatttacgagatcatcttcaaaatggttgaagataatcctagagat
gttggccatgagatggatggtctaagtattatatacggtgatgaatctctcgctcaccta
tatgaaaattctcgtatttcattagaccagctgtctgggcattcgggtatagttaggagg
gctgttgctctcgggcgttatctgcagaattcacatgcaatgattgcgacactttgtggt
ccagggagggagatactatcttggaaactttgtcctttagagagctttctgactgccgat
gagaagtatgggatagttgaacaggttatggtcgacgtcactaatcaagtgggtctggac
gttaatttggctatagctcatgaatggttattttctcctttacaatttatttctgggctt
ggacctagaaaggcagcatctctacagagatctctagtaagagctggagcaatctatact
cgcaaggacttgttgacagcccatggtcttggtaaaagggtgtttgtcaatgcagttggt
ttcttgcgcatccggcggactggactggctgctagcagcagtcaattcatcgatttgcta
gatgatactagaatacatccagaatcttatgttcttgcgcaggaattggccaaagatgtt
tatattgcggatgttcaggatgatgatgcaattgatgatgaggatgtgatggagatggca
atagagcatgttagagagaaacctgatttattaaagtactttgaggtggatgaatatgct
aaatcaaagaaatgggagaataagagagaaactcttgacaatataagattggagttgata
cagggctttcaggattggcgtagactacatgaagaaccaagtcaggatgatgagttttat
atgatttctggggagacagaggatacccttgccgaaggaagaattgtgcaagcaacggta
cgcagggtgcaacctcaaagagcaatttgtgtgcttgaatctggactgactggtgtgctc
accaaggaggactatactgatgattggagggacgatactgatttatcagagaagttgcat
gaaggtgatattattacttgcaggatcaaatcgattcaaatgaataggtatcaggttttc
ctaacttgtggagaaaaagagatgaggaagaactgttatgagaatcatcgaaatatggat
cccttctaccatgaagaccggagcagctcacagagtcagcaagaaaaagctcacaaagaa
aaggagcttgctaagaaacatttcaaaccgaggatgattgttcatccacgcttccaaaat
ataacagcggatgaagcaatggagttcttgtccgacaaggatccaggtgaaagtattttc
cgtcctagttctcgtgggccctcatatttgactttgactctgaaagtttctgatggggtg
tatgcgcacaaagacatagttgaaggtggaaaggaacacaaggacatcacaagcttgctt
cgtattgggaaaaccttgaaaatcggagaggacacatttgaggacttggatgaggtaatg
gaccgttatgttgatccgttagtagctcatttgaaggcaatgttgagctatcggaagttc
aggaagggcactaaagcagaagttgatgagctgttaagaattgagaaatccgagtatcca
atgaggattgtttattgttttggcatatcccatgaacatcctggcacatttattctaact
tacatacggagcacaaacccacgtcatgagtatattggcttgtacccaaagggattcaag
tttcggaagaagatgttcgagaacattgatcggctcatagcatatttccagagacatatt
gatgatccacaaaatgaatcagcgccatcaatccgatctgttgctgcaagaatgccaatg
cgaagccctgcaactgggggatcctccggtgcatcttttggcagtgggtggggtggttct
gccagtgatgatggtggctggagagggagaggtgatcacagaaatggtggcgatggggat
gggcatccaagtgggcttcccaggccagatggtgggcgtgggcgtgggcgtggccgtggc
cgaggccgaggctcttataatagtggccggggagatagcactagtaatgacaagcaggat
tctgactacagctctcaaaaatgggatgccaaggaaggtgatgatggatggagcagtttt
ccaggtgccaaagtgcaaaattcaccaggaagggaagcttttcctggtggttggggtggt
ggcggaagtggtggtggatgggctggtagcagcaacaatgatggtggtggaggcggttgg
ggcagtggtagtggtagtggaagtgtcggtggttggggtagcagcagcaagaatgatggt
ggtggaagtgggggtggttggggtagcggcagcaagaatgatggtggtggaagtggtagt
ggaagtggtggtggttgggtagcagcagcaagaatgatggtggtggaagtggtggtggtt
ggggtaacagcagcaagaatgatggtggtggaagtgggggtggttggggtagcagcagca
agaatgatggtagtggaagtggtgatggttggggtggcagctgcaagaatgatggtggtg
gaaggggttggggcagtggtagtggtggtggtgggcctggtggcagtggtagtggtggtt
ggggtagcactggcggcggcagcagtggttgcggtgggcagggaagcaatggtggctctc
agtcaggtgatctcgacggtgacgctggaaattctggctggggtggaaccaagaaaagtt
ctgtgcagcaagcagctgataatggtggatggtctggaagcagcggtggtaggggcggtg
gctggtgacacctcaattctgtttgaacagcccgtgtttagattttatgctgatggcttg
atgagagcatatgaattttgcagtaatgcaccctctctcgttaaatag
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integrated database retrieval system
