KEGG   Actinidia eriantha (wild kiwifruit): 130773057
Entry
130773057         CDS       T09464                                 
Name
(RefSeq) LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
aew  Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:aew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aew04121]
    130773057
   03400 DNA repair and recombination proteins [BR:aew03400]
    130773057
Enzymes [BR:aew01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130773057
Ubiquitin system [BR:aew04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130773057
DNA repair and recombination proteins [BR:aew03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    130773057
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-RING_5 DEAD Prok-RING_4 zf-rbx1 ResIII zf-ANAPC11 zf-RING_UBOX AAA_34 DEAD_2 UEV Rad50_zn_hook CAA_C zf-Nse zf-RING_4
Other DBs
NCBI-GeneID: 130773057
NCBI-ProteinID: XP_057486976
LinkDB
Position
3:complement(19126780..19138391)
AA seq 885 aa
MELDQDPVNFFMILDRWPQSPIQADDETDESQELLLSQSSETYLLGFVIVNIVGLQYYTG
SINGREMVGLVREPLNPHDPNAIKVLNTRTVQVGYIERSAASVLAALIDQNLISVEGIVP
NSSRGNRYKIPVQIHIFSHREAFERVKSAISRGGLQLLSNDDASFTLSEAIVVKERKVGR
EVRSLDEIFKLVDENASKKGALEPLEPPKDVIKSELFVHQKEGLGWLIHRENSGELPPFW
EERDEGYLNVLTNYHTKKRPKPLRGGIFADEMGLGKTLTLLSLIAFDKCGVNRSLIDSGG
AYNEQIEGIDEGDVKWVVLGNKKGKRGRPSKNDSNSLKKRSTEDTHLDKIAKGKFVGGLE
RNADVKTTLIVCPPSVFSTWVTQLAEHTIPGRLKVYMYYGERTYEAEELRKYDIVLTTYS
TLASEETWSESPIKKIEWWRVILDEAHVIKNVNAQQSRAVTRLETKRRWVVTGTPIQNGS
LDLFSLMSFLRFAPFSVKSYWTSLVQRPLAQGNEKGLLRLQVLMATISLRRTKDKGLIGL
PPKTIETCFVELSAEERELYDQMENEAKSVVRNYIHADSVARNYSAVLTILLRLRQICTD
LALCPSDLKSXFPSANIEDVSNNPELLTKLVILLQDGEDLECPICISPPSDIVITCCAHI
FCRSCILKTLTRTKGGCPLCRRPLSESDLFSSPPVSLDDDNSRVSRSITSSKVSALLQLL
SASKDQNPTIKSVVFSQFRKMLILLEEPLKAAGFKILRLDGAMNAKRRAQVIQEFGLSAP
DGPTILLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQTEDVKIVRMIA
RNSIEERVLDLQEKKKRLAREAFGRRGPKDRREVSIDGLRTLMAL
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggaattggaccaagaccccgtcaatttcttcatgattctcgaccgttggccccaatcc
ccaatccaagctgacgacgaaaccgatgaatcgcaagaactcttgctctctcaatcctcg
gagacctatcttctagggtttgtgattgtcaacatcgtcggattgcagtactacaccggt
tcgatcaacggccgagagatggtgggcctggttcgcgagcccttgaaccctcacgacccc
aacgcgatcaaagtgctcaacacgaggaccgttcaggtgggctacatcgagcgctccgcg
gctagtgttctcgcggcgttgattgaccagaatctgatctctgtggaaggcattgtcccc
aattcgtctaggggcaacaggtacaaaatcccagttcaaatccatattttctcgcacagg
gaggccttcgagagagtgaaatccgcgatttcgcgaggtgggttgcagttgctttcgaac
gatgacgcatcgtttacattgtcggaagccattgtagtgaaggaaaggaaagttgggaga
gaagtgaggagtttggatgagatcttcaagttggtggatgagaatgcaagcaagaagggg
gcgctggagccgctggagccgcccaaagatgtgatcaaatcggagctgttcgtgcaccag
aaggaagggttggggtggttgattcacagggagaattccggtgaattaccacctttttgg
gaggagagagatgagggttatctcaacgtgttgacaaattatcacaccaagaagcgtcct
aaaccgctacgtggtggaatctttgcggacgaaatgggcttgggtaaaactctcactttg
ctttctttgattgcttttgataagtgtggtgtgaatcgttccttaattgatagtggtgga
gcatataatgaacaaattgagggaatagatgaaggggatgttaaatgggttgttttggga
aataagaaggggaagcgggggaggccgagtaaaaatgatagtaactcgctgaagaaaaga
agtactgaagacactcatttggataaaattgcaaaaggaaagtttgtgggtgggttagaa
cgaaatgctgatgtgaaaacgacgttgattgtgtgtcctccgtctgtattttcaacgtgg
gtaacacagttagcggaacacactataccaggaaggctgaaggtgtatatgtactatgga
gaacggacttacgaagctgaggagcttcggaagtatgatatagttttgacgacttatagc
actctagctagtgaagaaacttggtcagaatcacctatcaagaagatagaatggtggaga
gtcattttggatgaggcacatgtgatcaagaatgtcaatgctcaacaaagccgcgcagtc
actagactggaaactaagaggaggtgggttgtcacagggacaccgatacaaaatggctcc
ctggatttattctccctcatgtcttttcttaggtttgcgccattctcagttaaaagctat
tggactagcttggttcagaggccacttgctcagggaaatgaaaaagggctcttgcggttg
caggttctaatggcgaccatttctttgaggagaacaaaagataagggtttaattgggttg
ccacctaaaactatagagacttgttttgtggaactttctgcagaagaacgtgagctgtat
gatcagatggaaaatgaggccaagagtgttgttcggaattatatacatgctgatagcgtg
gctagaaattactcagctgtgcttaccatacttttaagacttcgtcagatttgtacagat
ttagccttgtgcccttcagatctcaaatcgnattttccatctgcaaatattgaagatgta
tccaacaatccggagttgctgacaaagttggtcatattgctccaagatggagaggactta
gagtgcccaatttgtatttctccacccagtgatattgttattacatgttgtgctcacatc
ttttgtcgatcctgcatcttaaaaaccctcacacggactaaaggtggctgccccttatgc
cggcgtccattgtcagagtctgacctcttctcctccccacccgtatcgttggatgacgac
aactccagagtttcccgttctatcacatcttccaaagtgtctgctctcttacagctcctc
tcagcatcaaaggatcaaaacccaactataaaatcagttgttttctcacaattccgaaag
atgctgattttgcttgaagagccgctaaaagcagctggttttaagattctgcgcttggat
ggagcaatgaatgcaaaacgaagagctcaagtaatccaagaatttggactctcggcacca
gacggacctacaattttacttgcaagtctcaaagcttctggtgctggtataaatcttact
gctgcttctagggtctacttgttggagccatggtggaacccagcagttgaggagcaggct
atggatcgggtccacagaattgggcagacagaggatgttaagattgtgaggatgattgct
cgaaatagcattgaagagagggtactggatctgcaagagaaaaagaagaggcttgccaga
gaagctttcggtaggaggggcccaaaggataggagggaggttagcatagatggtctccgg
accctgatggccttgtga

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