Actinidia eriantha (wild kiwifruit): 130774137
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Entry
130774137 CDS
T09464
Name
(RefSeq) polyadenylate-binding protein 8-like
KO
K13126
polyadenylate-binding protein
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130774137
09123 Folding, sorting and degradation
03018 RNA degradation
130774137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130774137
03041 Spliceosome [BR:
aew03041
]
130774137
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130774137
mRNA cycle factors
Stress granule specific factors
130774137
Spliceosome [BR:
aew03041
]
Complex C
Other components
Complex C specific factors
130774137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_5
RRM_Nup35
RRM_3
RRM_7
RRM_10
PABC_AtC3H46
GH97_C
Motif
Other DBs
NCBI-GeneID:
130774137
NCBI-ProteinID:
XP_057488122
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MAQVQVPPQAVNAGGNQFVTTSLYVGDLEMSVTDSQLYDLFNQLGQVVSVRVCRDLTTRR
SLGYGYVNYTNPQDAARALEVLNFTPLNGKPIRIMYSHRDPSSRKSGAGNIFIKNLDKAI
DHKALHDTFSSFGNILSCKVATDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVY
VGPFLRKQERDMAMDKAKFTNVFVKNLSESTTEEDLKNIFGEFGTITSAVVMRDADGNSK
CFGFVNFENADDAARAVDALNGQNFDNKEWYVGKAQKKSERELELKFRFEQSVKEAADKS
QGLNLYIKNLDDSVGDDDLKELFSPYGTITSCKVMRDPNGISKGSGFVAYSTPEEASRAL
LEMNGKMIASKPLYVAHAQRKEDRRARLQVQFSQMRPVTMAPSVAPRMPIYPPGGPGLGQ
QIFYGQGPPAIMPPQPGFGYQQQLLPGMRPGGAPMPNFFVPMVQQGQRPGGRRAGAVPVQ
QGQQPVPLMQQQMLPRGRVYRYPPGRGLPDVSMSGVPGGMLSVPYDMGGMPLRDGGMSQP
IPIGALASALANASPVDQRTMLGESLYPLVEQLEPEIAAKVTGMLLEMDQTEVLHLLESP
EALKAKVAEAMEVLRNVQQQIADHAADGLVS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttcaggttccgccgcaggctgtgaatgctggtggaaaccagttcgtgacg
acgtcgctttatgtgggtgaccttgaaatgagcgtgaccgattcgcagctatacgatctg
tttaaccagctgggtcaggtggtctctgttcgagtttgcagggacttgactacgcggcga
tccctcggttacggctatgttaattatacaaatccccaagatgctgccagggcactggag
gtgctgaacttcactcctcttaatggaaagcccattaggataatgtattctcatcgtgac
cctagttcacgcaagagtggggctggaaacatttttattaagaatttggacaaggcgatt
gaccacaaagcactacatgacacattttcttcatttggaaatattctctcttgcaaggta
gctacagactcctctggtcagtcaaaaggctatgggtttgtgcaatatgacagtgaggag
gctgcccaaaaagctattgagaagcttaatggtatgttgttgaatgataagcaagtgtat
gtgggacccttccttcggaagcaggaaagagatatggctatggacaaggcaaagttcacc
aatgtctttgtaaaaaatctatcagaatcaacaacagaagaagatctgaagaatatattt
ggtgaatttggaacaatcactagtgctgtggtgatgagggatgctgatgggaactctaag
tgctttggttttgtcaactttgagaatgcagatgatgctgctcgagctgttgatgctctt
aatggacaaaattttgataataaggagtggtatgttgggaaagcccaaaaaaagtcagag
cgggaacttgaattgaaatttcgatttgagcagagcgtgaaggaggcagcggacaaatct
caagggctaaatctgtacattaaaaatttagatgatagcgttggtgatgatgatcttaag
gaattgttctctccatatggtaccataacttcctgcaaggttatgagggaccctaatgga
ataagcaaaggatcagggtttgttgcatattctactcctgaagaggcatctagagctcta
ttggagatgaatggcaagatgattgctagcaaacctctttacgttgcccatgcacaacgg
aaagaagatagaagagcaagattgcaggtacaattttctcaaatgcgtccagttacaatg
gcaccttcagttgctcctcgtatgccaatctacccccctggtggtcctggtcttggacaa
caaatattctatggacaaggtccgcctgctatcatgcctccccagcctggttttgggtat
cagcagcaacttttaccaggcatgaggcctggtggggctcccatgccgaatttctttgtg
ccaatggttcagcagggtcagcgtcctggtggtaggcgtgcaggggctgttccagtgcag
cagggccaacagccagttccgcttatgcagcagcagatgcttccaaggggccgggtctac
cgttatcccccaggtcgtggcctgcctgatgtttccatgtcaggtgttcctggaggcatg
ctttctgttccctatgatatgggtggcatgcctttgcgtgatgggggaatgtctcaacca
attcccattggcgctttggcatctgcccttgccaatgcttctcctgtagaccagaggacg
atgctgggtgaaagtctgtatccacttgtggaacagctggagcctgagatagcagctaag
gttactggaatgcttctggagatggatcagaccgaggtgttgcatctgctcgagtcacca
gaagctctgaaagcaaaggtcgcggaggctatggaagtcctcagaaatgttcagcagcaa
atagccgaccacgccgctgacggtctcgtttcctga
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