Actinidia eriantha (wild kiwifruit): 130774354
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Entry
130774354 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04120
Ubiquitin mediated proteolysis
aew04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130774354
04120 Ubiquitin mediated proteolysis
130774354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130774354
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130774354
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
U-box type E3
130774354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
130774354
NCBI-ProteinID:
XP_057488358
LinkDB
All DBs
Position
3:complement(21636166..21639712)
Genome browser
AA seq
1016 aa
AA seq
DB search
MASQKPQRSPAEIEDIILRKIFLVSLIDYMENDSRIVYLEMTAAEILSEGKELKXSRDLM
ERVLIDRLSGXFSSAEPPFPYLIGCYHRAYEEGKKISNMKDKAVRSEMESVVRQAKKLAV
SYCRIHLGNSDMFPNWEMSKSSVSPLLPLVFSEVSSSVDGFGGGVVVSGEYCPPGFLEEF
FRDSDFDRLDLILKQFVXGLERSVLKVSALVIFSSHEGFIVLDXFPIGAKSLVNHPWWIP
KGAYLNGRVIEMTSILGPFYXVSALPDHTIFKSQPDVGQQCFSEASTRRPADLLSSFTTI
KTVMNNLYEGLAEVLLSLLKNAETRENVLEYLGEVINKNSSRAHLQVDPISCASSGMFVN
LSAVMLRLCEPFLDANLTKRDKIDPKYVFNSTRLELRGLTALHASSEEVAEWLGDENPVK
TDVSRQQNDRENRLLQSQEATSSGSNVGGPSLFQNKPMSSCSGKAKYTFICECFFMTARV
LNLGLLKAFSDFKHLVQDISRCEDTLSTFKAMQGQSPSPQLDLDIARLEKEIELYSQEKL
CYEAQILRDGELLQRSLSFYRLMVVWLVGLVGGFKMPLPSTCPMEFACMPEHFVEDAMEL
LIFASRIPKALDGVLLDDFMNFIIMFMASPDFVRNPYLRAKMVEVLNCWMPRRSGSSVTS
TLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAW
RQIAKEEEKGVYLNFLNFLINDSIFLLDESLNKIPELKELEAEMSNTAEWERRPAQERQE
RTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGP
QRKSLSLKDPEKYEFRPKQLLKQIVNIYVHLARGDKENIFPAAITRDGRSYNEQLFSAAA
DVLRRIGEDGRLIQEFIELGAKAKLAASEAMDAETALGEIPDEFLDPIQYTLMKDPVILP
SSRITVDRPVIQRHLLSDTTDPFNRSHLTSDMLIPNIELKAKIEQFIRSQELKRHA
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcaaaaaccccaaagatctccagcggaaatcgaggacataattctcaggaaa
atcttcctcgtctcgctcatcgattacatggaaaacgattcccgtatagtctacttggaa
atgacggcggcggaaattctcagcgagggcaaggaattgaagnattcgagggatttgatg
gagagggttttgatcgatcgcctttcgggtnatttctcttcggccgagcctccgtttccg
tatctgatcggttgttatcatcgcgcttatgaggagggcaagaagatttcgaacatgaag
gacaaggccgtgaggtcggaaatggaatcggttgtcagacaagccaagaaattggcggtt
tcgtattgcaggattcatttgggtaattcggatatgtttcctaattgggagatgagtaag
tcgagtgtttcccctctattgccgttggttttctccgaggtgtcgagctcggttgatggt
ttcggagggggagtagtagtgagtggtgaatattgcccacctgggtttttggaggagttt
ttccgggactcggatttcgataggttggacctgattttgaagcagtttgtatgaggactt
gagaggagtgtgctgaaagtctctgctctggtaattttcagcagccatgagggctttatt
gttcttgattagtttccaattggagcaaagtctctggttaaccacccttggtggattccc
aagggggcgtatttgaacgggcgggtgatcgagatgacaagcattttggggcccttttat
natgtcagtgctcttcctgatcataccattttcaaaagccagcctgatgttggccagcag
tgcttctcagaagcatcaacccgtcgtccagcagatttattatcttcatttacaacaatc
aaaactgtcatgaataacctttatgagggtctggcagaagttcttctaagtctccttaaa
aatgctgaaactcgtgaaaatgttctcgagtatcttggagaagtgataaataaaaactca
tcgagggcccatctccaggttgatccaatatcttgtgcaagttcaggcatgtttgtcaat
ctcagcgctgttatgcttcggctatgtgagccatttctagatgcaaatttaacaaagagg
gacaaaattgatcctaaatatgtattcaacagtactcggttagagttaagaggattgact
gctctgcatgcatcatcggaagaagttgctgaatggttaggtgatgaaaatcctgtgaaa
actgatgtctctagacaacagaatgatagggaaaatcggttgcttcagtctcaagaagct
actagttccggcagtaatgttggtgggccttctctctttcaaaataagccaatgtccagt
tgtagtggaaaagctaaatacacattcatttgtgaatgtttctttatgactgcaagggtg
ctaaacttgggcctcttgaaagctttttcggactttaagcatcttgtccaggatatctca
agatgcgaagatactctctccactttcaaagctatgcaggggcaatcaccttccccacag
ctggacctggatatagctcgcctagagaaagaaattgagttgtattcgcaggaaaagctg
tgttatgaagctcagatacttagggatggggaacttcttcagcgttcattgtctttctac
cggttaatggtggtttggttggttggtctggttggtgggtttaaaatgcctctgccttcg
acttgcccaatggaatttgcatgcatgccggagcacttcgtggaagatgccatggaattg
cttatttttgcttctaggattcctaaagctttagacggtgtcttgctggatgactttatg
aactttattatcatgttcatggcaagtccagattttgtcagaaatccttatctaagagca
aagatggttgaagtgctgaattgttggatgccccgtagaagtggctcatccgtcacatct
acactattcgaagggcaccaactgtctctagagtatcttgtaaggaatcttctgaagctt
tatgtcgacatcgagttcacaggatcacacacacagttctatgacaagttcaacatccgc
cataatatcgcagaactcctcgaatacctatggcaggttcctagtcaccgtaatgcttgg
agacagattgccaaggaagaagagaagggcgtgtatttgaatttcttaaacttcctgatc
aatgatagtatttttcttcttgacgaaagtcttaacaaaattcctgaactcaaagagctg
gaagctgagatgtctaacacggctgaatgggagcgaagacccgcccaagagaggcaggag
agaacccggttgttccactcccaggaaaatatcattcgcattgatatgaagttggcaaac
gaagatgtgaccatgctagcatttacttcggagcagattacagctcctttcctattacca
gagatggtcgaaagagtagccagcatgctcaattactttttgcttcaacttgtgggacca
caacggaaatctcttagtttgaaggatcctgaaaaatatgaattccgtccaaagcagttg
cttaagcagattgtcaacatttatgttcatctagcaaggggtgataaagaaaatattttc
ccagctgccatcaccagggatggtcgatcttacaatgagcagttgtttagtgctgcggca
gatgtccttcggagaatcggtgaagacggacgccttatacaggagtttattgagcttggg
gcaaaagccaaacttgcggcttctgaggccatggatgctgaaactgctcttggagagata
cctgatgaattcctagacccaattcaatacactttaatgaaggatccggttattttaccg
tcgtctagaatcacagtcgatcgtccagtgattcagaggcatcttctgagcgatacgacg
gaccctttcaaccgttctcatcttacgtcggatatgctgattcccaacattgagctgaaa
gcgaaaatcgagcagttcattaggtcacaagaattaaagaggcatgcttaa
DBGET
integrated database retrieval system
