Actinidia eriantha (wild kiwifruit): 130775695
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Entry
130775695 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC130775695
KO
K06100
symplekin
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130775695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130775695
03019 Messenger RNA biogenesis [BR:
aew03019
]
130775695
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130775695
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
130775695
U7-dependent histone pre-mRNA processing factors
130775695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
130775695
NCBI-ProteinID:
XP_057489795
LinkDB
All DBs
Position
3:complement(4443193..4451634)
Genome browser
AA seq
747 aa
AA seq
DB search
MVGIMAANTREKVASLVNLAKFAMDIPSKLERLRSLKNELSQADSVLLRVFPLLLDLHTD
RFSPVRKFITELIGDIGLKNEEVIPEIVPVLMTQLKERTPAVARQAICCGIDLFHSSLTK
VAIQVCCILNLLFRLGYKIFKPGSDGIRFPAVRFVEAVILLYALDPTTANLFSEKFAEFN
ISWIRGGHHVLNVGDLSIEASQNLGLLLDELRLPTVKSLSNSMMIVLINSYFPHSSLHSM
LLASLSAIAKKRPAFYGRIRPVLLGLDPSSSVNKGVRVSGAHHALRKAFLSCLQCTRTSA
APWRDCLVGALSEIKGEGLVEQTLHQVCQINGSVERKDDIPTQEKSSSIEGCDAVLSNSG
RKRSGLQVACDMADDDVSGKRLRSTPTVSEGSEQDLSRDKVTVPSSGQSSSRGDGDNGPV
QQLVAMFGGLVAQGEKAIGSLEILISGISADLLAEVVMANMRNLPPDRPKAEGDEEPLLN
RGSSPNIVGRDAQFKHLSSILTQLLSVSIAPTHGFFFRCPTVFIQCLDFVQIEWCIFTYN
LQNPQGDKELALVAVADNDVICIGVRYESEQALVPLPVCSSDEVQSAKETGFSALPSGVL
DVGSLESGIPGLYSVAHSDRLAETLIVPSLMPTDLEDASQEQVSSLIKSPLDFVQSLSTD
RSEELSPKAAITDASSIKSSTATSVGLFAQFVLPKMSAPVMNLADEEKDTLQKLAFARIV
EAYKQIAIAGGSHVRFSLLAYNTCGNH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaatcatggctgcgaacacgagggaaaaggtcgcgagtctcgtgaacttggcc
aagttcgccatggacataccttcgaagctcgagcggctgcgttcattgaagaacgagttg
tcacaggcagactcggtcttgctccgagttttcccgctccttcttgacctccacaccgat
cgcttcagtccagttcgcaaattcattacagagttgattggtgatataggattgaagaat
gaggaagtgatacctgaaattgtacctgttttgatgactcaactgaaagaacgaacacca
gcagtcgctcgacaagccatttgttgtggaattgatttatttcattccagtctcacaaaa
gttgcaatccaggtatgttgtatcttgaatcttttattcaggttgggttataagattttc
aagccgggaagtgatgggataaggtttccagcagtgaggtttgttgaagctgttattctt
ctatatgcacttgatccaacaactgctaacttgttttcagaaaagtttgccgagttcaat
atatcatggattcgtgggggtcatcatgtactcaatgttggagatttatcgattgaagca
agtcagaatctgggtctgctgcttgatgagctcaggctcccaacagtgaaatctctcagt
aactcgatgatgatcgtgctcatcaatagttattttcctcactcatcacttcattctatg
cttcttgctagtctttcagcaattgcaaagaaaagacctgctttttacggtcgcattcgg
ccagtcttactaggtttggatccctcaagctctgtcaataaaggggttcgtgtttctggg
gcacatcatgctttaaggaaggccttcctctcctgcttgcagtgcacacgcacgagtgct
gcaccgtggcgtgattgtctagttggtgcattgagtgaaataaaaggtgagggattggtg
gaacaaacccttcaccaagtttgccaaatcaatggaagtgtagagagaaaggatgatatt
ccaactcaggagaagtcatcatcaattgaaggatgtgatgctgtgctcagtaattctggg
aggaaaagatctgggctacaggttgcctgtgatatggctgatgatgatgtgtctggaaaa
cgtctcagatcaacacctaccgtttcagagggatcagagcaagacttaagtagggataag
gttaccgttccttctagtggacaatcatcgtctagaggagatggagataatggacctgtg
cagcaacttgttgccatgtttggtggattggttgctcagggtgagaaagctattggttca
ttagagattcttatttctggtatatctgctgacttgctagctgaagtggtaatggctaat
atgcgaaacctccctcctgatcgccctaaagctgaaggggatgaagaaccattactgaat
agggggtcatctccaaatattgttggtcgtgatgcccaattcaaacatctatcttcaatt
ctaacgcaactgctttctgtatccattgctcctacacatggatttttttttagatgccca
actgtcttcatccaatgtttggattttgtgcaaattgagtggtgtatatttacttataac
ttgcagaatccacaaggggataaggaactggctttggtggctgtagctgataatgatgtc
atatgcattggtgtaagatatgaaagtgaacaagcattggtacctttgccagtttgttct
tctgatgaagttcaatctgcaaaagagactggtttttcagctcttccatctggagtcctt
gatgttgggagtctagagagtgggatacctggtctgtattcagttgctcacagtgataga
ctggctgaaacactaatagttccatcattaatgccgactgatttagaagatgccagtcaa
gagcaagttagtagtttgatcaagtcaccgctggatttcgtacaatcattatcaactgac
agatctgaggaacttagccccaaagcagctatcacagacgctagcagcattaaatcctca
acagcaacttctgttggattgtttgctcaatttgtcctgcccaagatgtcagcacctgtt
atgaaccttgctgatgaagagaaggataccttacaaaaattggctttcgcacgcatcgtg
gaggcttataagcaaatagcaattgccggaggttcgcatgtccgtttttctttacttgcc
tataacacgtgtggcaatcactga
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