Actinidia eriantha (wild kiwifruit): 130775851
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Entry
130775851 CDS
T09464
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130775851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130775851
03036 Chromosome and associated proteins [BR:
aew03036
]
130775851
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130775851
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130775851
PBAF complex
130775851
GBAF(ncBAF) complex
130775851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
fvmX1
DUF4795
Motif
Other DBs
NCBI-GeneID:
130775851
NCBI-ProteinID:
XP_057489875
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Position
4:315051..321792
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AA seq
617 aa
AA seq
DB search
MKSCSPEKSYVRVAPRGGEVNMEVADCSSFTIVHLCLLPVLQMTGRLLWTDGCWNGFLAS
INCVKTMLESKYDSFLVQPQHFGCVDIVSGVRVVRLESKYDSFVVQFQHFGYDHQATNRG
RPPPPPAPAPETTPQKLDSSPITNPTTPTAPSAASKETPATAPSSKPPDPPSTATARLPD
LIYIPTYSRWFSWDNIHECEVRFLPEFFDAKSPSKNPRDYKYYRNSIIRKFRENPTTKIT
FTEARKTIIGDVGSVRRVFDFLETWGLINYSPGPASKLPLKWEEKETKSNTALSQSTEPT
GNSVEPTVPKKRLCSGCKTVCSIACFACDKYDLTLCARCYVRGNYRVGVNSTEFRRVEIN
EEIKADWTEKEILHLLEAIMHYGDDWKRVAEVVGGRSEMECVARFIKLPFGEQFVGASDS
TDVDKKFYQMEDQNNTEFGLQSFGKPFANKRMRLSPLADASNPISAQAAFLSALVGVEVA
EAAASAAVKALAEFSYGAIKESPGSLSSHARQQEHDATANGDTSLKTLEGSLVDVKSQLD
KEEQDLERAIFSIAEVQMKEIQDKISHFEEFESQVEREWQQLQQMKNTLFVDQLTLLFNK
TPAPKAGESVQQLVKIE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcatgctcaccagagaagtcatatgtccgagtcgctccacgtggcggagaagtg
aacatggaagttgcggactgctcttccttcacaattgtacatctatgtttactaccagtg
cttcagatgactggtagactgttatggacggatggatgctggaatgggtttctggcttcc
attaactgtgttaaaaccatgttagaatcaaaatatgattcatttttagtccagccccag
cattttgggtgcgtagatatagtctctggtgttcgtgttgtccgattagaatcaaaatat
gattcttttgttgttcagttccagcattttgggtatgaccaccaagccaccaacagagga
agacctcccccgccccccgccccagctccagaaaccacacctcaaaagctggactcctcc
ccgataacaaatcccaccactccaaccgctccttccgcggcctccaaagaaacccccgcc
accgcccccagttccaagccgcctgacccgccttctaccgccaccgccaggctgcctgac
ctcatatacatccccacttattcccggtggttttcgtgggacaacattcacgaatgtgag
gttcggttcctcccggagttcttcgatgcgaagtcgccttcgaagaaccctagggattac
aaatattacaggaattctatcatcagaaagttcagagaaaaccctaccactaagatcacc
ttcacggaggctcgtaagactattataggagatgttggatctgttcggagggtgtttgat
ttcttggagacttggggtttgattaattactcaccgggtccagcgtccaaattgcctttg
aagtgggaagaaaaggagaccaagtctaacacagcactgtcgcagagcaccgagcccacg
ggcaattcggttgaacccacggtacccaagaagagattgtgcagtggttgcaagactgtg
tgcagcattgcttgctttgcctgtgataagtatgatttgactctttgtgcaaggtgctat
gtccgcggaaactatcgggttggtgttaattctactgaattcagacgagtagagatcaat
gaagagataaaggcagattggactgaaaaggaaattttgcaccttttagaagccattatg
cattatggggatgactggaagagggttgcagaggttgttggtggtagaagtgaaatggaa
tgtgtagctcgctttatcaagcttccttttggcgagcaatttgttggagcttcagactct
actgatgtcgacaagaaattttatcaaatggaggaccagaataacacagaatttggattg
caaagttttggaaagccatttgcaaacaaaagaatgcgtctcagcccacttgctgatgca
agcaacccaatttcagctcaggctgcatttttgtcagctttagtgggtgtagaggtggca
gaagcagctgctagtgctgcagtgaaagctctggctgagttcagttatggagccattaaa
gagagtcctggatctctttcaagtcatgcaagacagcaagaacatgatgctacagctaat
ggtgacactagtttgaagacattggaaggatcccttgtagatgtgaaatctcagcttgac
aaggaagagcaggacttggagagggcaatctttagcattgctgaagtgcagatgaaagag
attcaagacaaaatatcacattttgaggagtttgaatcgcaagtggagagggagtggcaa
caactgcaacaaatgaagaacacactttttgtggatcagcttactctcctctttaacaaa
actcctgcaccgaaagctggagaaagcgtgcagcagttggttaaaatagaatga
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