Actinidia eriantha (wild kiwifruit): 130776134
Help
Entry
130776134 CDS
T09464
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130776134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130776134
Spliceosome [BR:
aew03041
]
Complex A
U1 snRNP components
U1 related factors
130776134
Complex B
130776134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
130776134
NCBI-ProteinID:
XP_057490185
LinkDB
All DBs
Position
4:complement(3270065..3299757)
Genome browser
AA seq
1041 aa
AA seq
DB search
MANNPQSSGAQPLRPPAVGSMVPQTFSPSFTMQFRPMIPSQQGQPFIPAVSASQQFRPVG
QGISSSNIGIPSNQSQAPPQYSQPMQQLPPRPALPAHGQSIPMPYIQPNMPLTSSSPLSQ
QTAVPLNNHMHGLGGPGGPFSSYTFAPSSFGQAQHTVTASSQFQPSQMHAPVAQAGGQPW
LSTGSQGGPLVTPMQQIAKQSSDMTVTSPAVNVPSTAQQSLSDWQEHTSQDGRRYYYNKK
TRQSSWEKPLELMTPIERADASTVWKEFTTQDGRKYYYNKVTKQSKWQVPEELKVAREQA
EKPASQEAQSEISATSNSIEDVNVSSAEQSSAAVTSVSSISTSTITGLASSPVPVTPVVA
VNAAPVVVSGSSAFPVAPSTATSAVGVSSLGINVTPSPSAASGSAGVPAALDSTDATPMA
SFDNSSSHDVSNSLSGASMQDIEEAKKGMAVAGRINETPLEEKPVEDEILVYATKQEARN
AFKALLESANVESNWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRM
RMKKAREEFTKMLEDCEELTSSTRWSKAISMFEEDERFKGIERPAEREDLFKNYLVDLQK
KEKEKAQEEYRRNRLEYRQFLETCGFIKVNTQWRKVQDRLEDDERCSRLEKFDRFEIFQE
YIRDLEKEEEEQRKIHKEQLKRAERKTRDEFRKMMEEHVAAGILTAKTHWRDYCMKVKDS
APYQAVALNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDAVKLGKVTITSMSSLEDFKAA
ILEDIGSPLVSDINMKLVFEDLLGRAREKEEKEAKKRLRLADDFNDFLCTIKEITASSVW
DESRQLFEESSEYRLIGEESFAKEIFEEHVLRLQEKAKEKERKREEEKAKKEKEREEKEK
RMEKEKKDKEREKEKDKEREKEKVKERSKKDEPESENMDVSDSYGPREEKRREKDKDRKH
RKRHHSPADDISSDKDEKEEPKKSRRHGSDWRKSRKHAYTPESDSESKHKRHKRDHRDGS
RRNGGYEELEDGELGEDGEIR
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggccaataaccctcagtcttctggtgctcagcctctccgccctccagcagttggatca
atggtcccacaaactttcagtccatcctttactatgcaatttcgacctatgatcccgtca
cagcaaggacaaccttttatccctgcagtttcagcttctcaacaatttaggccggttggg
caaggtatatcttcttccaacattgggatcccttccaatcaaagtcaagcaccaccgcaa
tattctcaaccaatgcagcagttacctccaaggcctgccctgcctgcacatggacagtcg
ataccaatgccatacatccaacctaacatgcctcttacatctagctcgcccctgtctcag
caaactgctgtccctttgaataatcatatgcatggtttaggtggccctggagggcctttc
tcttcatatacatttgcaccatcttcttttggtcaggcacaacatactgtcactgcctca
tcccagttccaaccctcacaaatgcatgcaccagttgcccaggctgggggacagccttgg
ttgtcaactggaagtcagggtggaccgcttgtcacccctatgcaacagattgcgaaacag
tcttcagacatgactgtcacatctccagcagtaaatgttcccagtactgcgcagcagtcc
ttgtctgattggcaagagcatacatcccaggatgggcgaagatattattacaacaaaaaa
acaagacaatctagttgggaaaaacctttggaattaatgacaccaatagagagagcggat
gcatcaactgtctggaaggaattcacaactcaggatggtagaaagtactactataataag
gttacaaagcaatctaaatggcaagtacctgaggaattgaaggtggctcgtgaacaagca
gagaaaccagctagccaagaagcacaatcggaaataagtgcgacttctaattccattgaa
gatgtcaatgtctcttctgcggaacaatcatctgctgcggtaacttcggttagctccatc
tctacttcaaccataactgggctagcttctagcccagttccagttacgccagttgttgct
gttaatgctgctcctgtggtggtttctggatcctcagcttttcctgttgcaccttctact
gcaacaagtgccgttggtgtttcctctcttggcataaatgtcactccctcgccgtccgct
gcttcaggaagtgctggtgttccggctgctttagatagcactgatgctacaccaatggct
agctttgataattcatcatctcatgatgtttcaaattctttaagtggggcttctatgcag
gatattgaggaagcgaaaaagggaatggcagttgctggaagaatcaacgagacaccgtta
gaggagaaacctgtggaggatgaaattttggtgtatgccaccaagcaggaagcgagaaat
gcatttaaagcacttttggagtctgccaatgttgagtctaactggacttgggagcaggca
atgcgagtgataatcaatgacaaaaggtatggcgctttaaaaacactgggtgagcggaaa
caggcgttcaatgagtacttgggccaaaggaagaagttggaggcagaggaaaggcgcatg
agaatgaaaaaagcacgtgaagagttcacaaagatgttggaagattgtgaggaactcaca
tcatccacaagatggagcaaagctataagtatgtttgaagaagatgagcgattcaagggc
atagagcgacctgcagaacgtgaagatctgttcaaaaactacttggtggaccttcaaaaa
aaggaaaaggaaaaggcgcaggaggagtatcggcggaatagattagagtacagacaattt
ttggaaacttgtggctttatcaaggtgaacacccagtggaggaaagttcaagatcggcta
gaagatgatgaaagatgttcacgactagaaaaatttgaccgctttgaaattttccaggaa
tatattcgtgatttggagaaggaagaggaagagcagagaaagatacataaggaacaattg
aagcgggctgaaaggaaaacccgtgatgagtttcgcaagatgatggaagaacatgttgcg
gctggtatacttacagctaaaactcactggcgtgattattgtatgaaggtcaaagattct
gcaccctatcaggctgttgcactgaatacatctggttctacaccaaaagatttgtttgag
gatgttgctgaagaattagagaaacagtatcacgaggacaaaactcgaataaaagatgct
gtgaagttggggaaggttaccatcacatctatgtcatctttggaagattttaaggctgct
attttggaggacataggttcaccactggtttcagatatcaatatgaagcttgtatttgag
gatctacttgggagagccagagaaaaggaggagaaagaggcgaaaaagcgtctacgtctt
gccgatgactttaatgattttttgtgcaccatcaaggaaatcactgcatcttctgtttgg
gatgaaagcagacaattatttgaggaaagctcagagtacagattaattggagaagagagt
tttgccaaggagatctttgaggaacatgtcttacgattacaggaaaaggcaaaagaaaag
gaacgcaagcgagaggaggaaaaggcaaaaaaggagaaagagagagaggagaaagaaaag
agaatggagaaggagaaaaaggataaagagagagagaaagagaaagacaaggaacgtgaa
aaggagaaggtcaaagaacggtctaagaaagatgaaccagagagcgaaaatatggatgtg
agtgacagctatggccccagagaggagaagcgaagagaaaaagacaaagatagaaagcat
cggaagcggcatcatagtccagctgatgacatcagttcagacaaggatgaaaaagaggag
cctaagaaatcccgtcgacatggcagcgactggagaaaatcaagaaaacatgcatataca
cctgaatcagatagtgaaagcaagcataaaagacacaagagagatcaccgtgatggctct
cgtaggaatggtgggtatgaagaacttgaagatggggagcttggggaggatggtgagatt
cggtag
DBGET
integrated database retrieval system
