Actinidia eriantha (wild kiwifruit): 130776158
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Entry
130776158 CDS
T09464
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130776158
Enzymes [BR:
aew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130776158
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
130776158
NCBI-ProteinID:
XP_057490247
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Position
4:3973959..3982059
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AA seq
675 aa
AA seq
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MGGRRKFGSFIRSICSCGASERGTAGHGKDLGSMSPRGVHLQIQDRQVVIDNGILQVTLS
KPEGIVTGIRYNGIDNLLETRNDESNRGYWDVVWNSPDDTGRTGVFEVIKGTDFKVIMET
EEQVEVSFSRPWDPSLKGKLVPINIDKRFIVLRGSSGFYSYAIYEHVGLPEWPAFSLGET
RIAFKLRKEKFHYMAVSDNRRRFMPLPDDRLPGRGQALAYPEAVLLVNPLEPELKGEVDD
KYQYSCENKDLRVHGWICTDPPVGFWQITPSDEFRSGGPIKQNLSSHVGPTCLAMFLSGH
YSGDDLVPKFGQGEAWKKVFGPVFIYLNSVMDGDDPLTLWEDAKNQMLIEVQSWPYSFPA
CEDFPTSDQRGSVSGRLLVRDRYVSNDYISANGAYVGLAPPGDIGSWQRECKDYQFWTKA
DDNGYFSVNNIRTGDYNLYSWVPGFIGDYRNDVAITITPGCDIDIGDLVYEPPRDGPTLW
EIGIPDRSAAEFYMPDPDPKYINRLFINHPDRFRQYGLWERYAELYPNGDLVYTVGVSDY
KKDWFFAQVTRRKNDNSYQGTTWQIKFNLDSVDQTGTYKLRVAVASATLAELQVRVNDPN
TNRPLFSSGLFGRDNAIARHGIHGLYWLYGVDIPYALLVQGDNTIYLTQTRGQSPWQNLM
YDYIRLEGPPSKAAL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtcggcgtaagttcggaagcttcattagaagtatatgcagttgtggagcatct
gagagaggaaccgccgggcacgggaaggatctcggatcaatgtcacctcggggggtacat
ttacagattcaagatcgccaagtggtgatcgacaatggcatcctccaagtcacattatca
aaacctgagggaattgtcaccggaatacgatataatggcattgacaatttgctcgagacc
cgcaacgatgaaagtaatagaggttactgggatgttgtttggaattcgccagatgataca
ggaagaactggtgtttttgaagtgattaaaggaacagattttaaagtaattatggaaacg
gaggaacaagtagaagtgtcattctctagaccatgggatccctccctcaagggcaagctt
gtacccataaacatagacaaaaggtttatagtgcttcgtggttcatcaggcttctactcc
tatgccatttatgaacatgtaggtttgccagaatggccggctttcagccttggtgagacc
aggattgctttcaagctcagaaaagagaagttccactacatggctgtgtcagataatagg
cgaagattcatgcctttgccagatgaccggttgccaggaagaggtcaagcccttgcatac
cctgaagcagtcctccttgtcaatcctttagagcccgaattgaagggagaggtggatgac
aaataccagtactcctgcgagaacaaagatcttcgggtccatgggtggatatgtacggac
cctccagtaggattctggcagattacacccagtgatgagttccggtccgggggacccatc
aaacaaaacctctcctctcatgtgggtcccacttgtcttgctatgtttcttagtggccac
tattctggggatgatctggtgccaaaatttggacagggggaagcatggaagaaagttttt
ggccccgtattcatctatcttaattctgtgatggatggagatgacccacttacgctttgg
gaggatgccaaaaatcagatgctgatcgaagtccagagctggccttatagttttccagca
tgcgaggattttccaacatcagatcaacggggtagcgttagtggtagattgctagtacga
gataggtatgtcagcaatgattatatatcagcaaacggtgcctatgtcgggttggcgcct
cctggagatattggatcatggcagagagaatgcaaggactatcaattctggacgaaagca
gatgataatggctacttttctgtcaacaatatacgtactggtgactataacctgtactca
tgggtccctggatttattggagattatcgtaacgatgttgctattaccataaccccaggt
tgtgacattgacataggtgatcttgtatatgaacctccaagagatggacccacactgtgg
gaaattggcattcccgatcgctctgctgcagaattttacatgcctgatcctgatcctaag
tatatcaacagactttttatcaatcatcctgacaggtttagacagtatggattgtgggag
agatacgcagagctataccctaacggggatttagtctacacagtcggcgttagtgattat
aaaaaagactggttctttgctcaggtcacgaggagaaaaaatgacaattcatatcaagga
accacctggcagatcaagttcaacctcgacagtgtggatcagaccggaacctacaaactg
cgagtggcggtagcatctgcaactcttgctgaattgcaggttcgtgttaatgatccgaac
acaaaccgacccctattttcaagcggactatttggaagggacaatgcaattgccagacac
ggaattcacggactctattggctgtacggtgtggacattccgtacgctcttttggtgcaa
ggggataacaccatctatttgactcagacaaggggtcagagcccatggcagaatctcatg
tacgactacattcggttggaaggtcccccatctaaagctgcactgtga
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