Actinidia eriantha (wild kiwifruit): 130776178
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Entry
130776178 CDS
T09464
Name
(RefSeq) protein ALTERED SEED GERMINATION 2-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130776178
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130776178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
DUF5610
Motif
Other DBs
NCBI-GeneID:
130776178
NCBI-ProteinID:
XP_057490277
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Position
4:4376325..4392129
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AA seq
747 aa
AA seq
DB search
MESLSFHDGNITDLVDRRTLDVRRDNGHSLQMHSSIIRRLSQERELEGHSGCVNAVAWNS
KGSLLISGSDDTRVNIYSYSSRKLLHSIETGHSTNIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLRGSGPDECDISPSAVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREA
SSCPPAGLSNQECRNVLLDLRCGAKKSLADPPKQLLALKSCDISSVRPHLLLIGGSDSFA
RLYDRRMLPPLLSCRKMSSPPSCVNYFCPMHLSDRGRSTLHLTHVAFSPNGEEVLLSYSG
EHVYLMDVNHAGDSAMQYTSADASKIMTFTSVLNGVELQPSLSGVLRNGHPLNSKVSATL
DKCRRLVQIAEKFLEYTDYFYGIEACNEVVDGHGREIGPLLMHECLCIRAALLLKRKWKN
DAYMALRDCCRARRIDSSSFRALHIQSKALLQLGKQKEALEFAIAAQAMAPLNSEVAETL
ENIKKHLAAAEAQKNSKSNDGAPKPEPRAGRVLSLSDILYRSEATSDASQDGPRSEREDY
DDDDELELYFETSVSGDEGHDIEVNVLHGSLNLRIHRGGDSYMETSHTNGSCKSPTSSSQ
NDRTTYQPEAVIDMKQRYVGHCNVGTDIKQASFLGERGEYVASGSDDGRWFIWEKKTGRL
IKILVGDESVVNCVQCHPFDCVVATSGIDSTIKIWTPTASVPSFVAAGAAGPENDNVLDV
MESNQRRLCRNREMVLPLEFWERFRMH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctcagctttcacgacggcaacatcaccgacctcgtcgaccggcgaactctc
gatgtccgccgcgacaatggtcacagtttacaaatgcactcttcgataataagaaggctt
tcccaggaaagagaactggaggggcattcgggttgtgtaaatgctgtagcttggaactca
aaaggctcactcctgatatctggatctgatgatacacgagtcaacatttatagctattca
agccgcaagcttttgcactctattgagactgggcattcaacaaatatattctgcacaaag
tttgtccctgaaacttctgatgaattagtggtctctggtgctggagatgctgaagttcgg
ctttttaatctgtctcgtttaaggggtagtggacctgatgaatgcgatattagtccatca
gcagtgtttcagtgccacagtaggagagtgaaaaaactagctgtcgaagttggaaatcct
aatgttgtatggagtgcgagtgaagatgggactctcaggcagcatgactttcgggaggct
tcatcttgtcctccagctggattgtctaatcaagaatgtcgcaatgttttacttgatttg
cgatgtggggcaaagaagtcattagctgatcctcctaaacagctgctggctctgaaatct
tgtgatataagttctgtccggcctcatttgcttcttatcggtgggagtgattcctttgct
cgtttatatgatagacggatgctgccaccactcttatcctgtcgaaagatgtcatcacca
ccttcgtgtgtgaactatttctgtccgatgcatctttctgatcgcggtcgttctaccttg
caccttactcatgttgcatttagtccaaatggagaagaggttcttcttagttatagtgga
gaacatgtatatttaatggatgtaaatcatgctggtgatagtgccatgcaatatacgtca
gcagatgcttcaaagatcatgacctttacttcagtactcaatggagtagaattgcagcca
tcattgtctggtgttctccgaaatggtcatcctttaaatagcaaagtctctgctacgctt
gacaagtgtagaagattggttcaaattgcggaaaaattcttggagtacacggattatttt
tatggaattgaggcttgcaatgaggttgtggacggtcatggtcgtgagattggacctctg
ctaatgcatgagtgtctatgcatccgtgcagccttgttgctcaagcggaagtggaagaat
gacgcttatatggctctaagagattgctgcagagctagaaggatcgattcttcttcattt
agggcacttcacatacagtctaaagctttattgcagctgggaaaacaaaaagaagctcta
gaatttgctattgcagctcaagccatggcaccgttgaattctgaagttgcagaaactttg
gagaatataaagaaacatcttgctgcagccgaagctcaaaaaaatagcaaatcaaatgat
ggagcacctaagcctgaacctcgagctggcagagtattatcattgagtgacatactctac
cggtcagaggctactagtgatgcttcacaagatggtccgaggtcggaaagagaagattat
gatgatgatgatgagttggagttgtattttgaaacatcggtatctggtgatgaagggcat
gacattgaagtcaatgttcttcatgggagtttgaatttgagaattcatagaggaggtgat
tcatatatggagaccagtcatacaaatggctcttgtaaatcacctacatcatcatctcag
aatgacagaacaacttaccagcctgaggcggtgatagatatgaaacagagatatgttggc
cactgtaatgttgggactgacataaagcaagctagttttcttggcgaaagaggtgaatat
gttgctagcgggagcgatgatgggagatggtttatttgggaaaagaaaactggtagacta
ataaagattcttgttggtgatgaatctgtggtcaactgtgtgcagtgccatccatttgat
tgtgttgtggctaccagtgggattgatagcaccataaaaatttggactccaactgcttca
gttccatcctttgtggctgctggagctgctggaccagagaatgataatgtgttggatgtg
atggaaagtaatcaacgcagactatgccgtaatcgggagatggttctgccccttgaattt
tgggagcggttccggatgcattag
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