KEGG   Actinidia eriantha (wild kiwifruit): 130776509
Entry
130776509         CDS       T09464                                 
Name
(RefSeq) LOW QUALITY PROTEIN: suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
aew  Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:aew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aew03041]
    130776509
Spliceosome [BR:aew03041]
 Complex B
  Other components
   Complex B specific factors
    130776509
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N VPS8_N Beta-prop_SPT8 Beta-prop_NUP159_NUP214 DUF7165 Beta-prop_LRRK2 Beta-prop_WDR19_1st WD40_like Beta-prop_IFT122_2nd Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 130776509
NCBI-ProteinID: XP_057490747
LinkDB
Position
4:complement(14656328..14700018)
AA seq 505 aa
MSKLEIEARDMIKIVLQFCKENSLHQTFQILQNECQVSLNTVDSLETFVADINSGRWDAI
LPQVAQLKLPRKKLEDLYEQIVLEMIELREXLRQTQVMGVMKQEQPERYLRLEHLLVRTY
FDPHEAYQDSTKEKRRPQIAQAIAAEVSVVPPSRLMALIGQALKWQQPRGLLPPATQFDL
FRGTAAMKQDVDDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIEVWDHISG
KLKKDLQYQADETFMMHDNAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLEHAH
SKGVTSLIFFRDGSQILSTSFDGTARIHGLKSGKLLKEFRGHSSYVNDAIFTADGARVIT
VSSDCTVKVWDVKXCLRTFKPPPPLRGGDASVNSVHLFPKNTDHIIVCNKTSAIYVMTLQ
GQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNMYCFSHQSGKLEHLMKVHEKDVI
GISHHPHRNLVATYGEDCTMKLWKP
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctaagctagaaatcgaagctcgagacatgattaagatagttctccaattttgcaaa
gaaaactctttgcatcaaactttccaaatattacaaaatgagtgtcaggtttctctgaat
acggtagacagccttgaaacatttgttgctgatattaacagtggaaggtgggatgcaata
ttacctcaagtggcacaacttaagcttcctaggaagaaacttgaagatctatatgaacag
attgttttggaaatgattgaacttcgagaantattaaggcaaacccaggtaatgggtgtt
atgaaacaagagcaacctgaacgatacttgcgacttgaacatctccttgttcgaacttat
tttgatccacatgaggcttatcaagattcaactaaagagaaaagacgtccacaaatagct
caagctattgccgccgaggtttctgtggttccgccatcacgactaatggctttgattggc
caggctttgaagtggcagcaaccaagagggttactcccaccagcaacacaatttgactta
tttcgagggacagctgctatgaaacaagatgtagatgatatgtatccaacaactcttggg
catactattaagtttggaaagaaaagccacccagaatgcgctcggttctcaccggacgga
cagttccttgtttcttgctctgttgatggatttatcgaggtttgggaccacataagcggg
aaactaaagaaggatcttcaataccaagctgatgaaacatttatgatgcacgataatgcc
gtcctttgtgttgattttagtagagattctgagatgcttgcatctgggtcccaagatgga
aaaatcaaagtttggcgcataagaactggtcagtgcttgcgccgtcttgaacatgcacat
tctaagggtgtcaccagtcttatcttctttcgggatggaagtcagatcttaagtacatca
tttgacggcacagcaagaattcatggcctaaaatccgggaaattgttgaaggaatttcgt
ggacattcatcctatgtgaatgatgccatctttacggctgatggagctcgtgtaattact
gtatctagtgattgtactgtcaaggtttgggacgtaaagnactgtctacgtacgtttaaa
ccaccacctcctctaaggggtggtgatgcatccgtgaattctgttcatctttttcctaaa
aatacagatcacataattgtatgtaacaagacttcagcaatctacgtaatgacactgcaa
ggacaggttgtaaagagcttctcatctggtaaaagagaaggtggagactttgtagcagct
tgtgtatcgcctaaaggggaatggatttactgtgttggtgaagatagaaatatgtactgc
ttcagtcatcaatctggtaaacttgagcatctaatgaaagtacatgagaaggatgtaatt
ggtataagtcaccatcctcacagaaaccttgttgcaacatatggtgaggactgcacgatg
aaattgtggaagccttga

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