Actinidia eriantha (wild kiwifruit): 130776613
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Entry
130776613 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130776613
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03440
Homologous recombination
aew03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130776613
03460 Fanconi anemia pathway
130776613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aew03400
]
130776613
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130776613
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
130776613
FA (Fanconi anemia) pathway
Downstream FA components
130776613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Yippee-Mis18
RT_RNaseH
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
130776613
NCBI-ProteinID:
XP_057490857
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All DBs
Position
4:513241..530697
Genome browser
AA seq
1270 aa
AA seq
DB search
MDSSTPMRNPRKNSHHIGGIAVEFPYQPYGSQMAFMGRVISTLDRAQRDGHCHALLESPT
GTGKSLSLLCSVLAWQKNYQSRNFGNDPAHLTPAPEAKTDPLGHGGGFIPETQPSGLPSA
TNIKSSKKKTVPTIFYASRTHSQITQVIREYRKTTYRVPMAVLASRKHYCTNRHVHGKDN
IDEECKLLLNDRVVGCSEFKNVHKVKGHSSLNKGGSLEVHDIEDLVKVGQEMKGCSYFAA
RSMAEDAQLVFCPYSYLVNPVIRKAMEVDIRGAILILDEAHNIEDIARDGGSVNVDEDVL
HKLQTELGQLTFVNPTIYQPLNEMIQDITSWMERRKSSLEKREFQHYFSCWSGDKALREL
QEANISRHCFPILQECATKAIKAASDAELEIAHLTGMSATTLEGLFSSLSYFFSGNGAHI
HDYQLVLQRYVKRDAGNVGAGWTNTMSLWCLNPAVVFRDIADLSLSVILTSGTLSPMNSF
SSELGVQFGTCLEAPHVIDVESQLWAAVISTGPGNYPLNASYKTADGYAFQDALGMSLEE
ICKIVPGGSLIFFPSYKLMDKLCNRWRETGQWSRLNAQKSLFVEPRGGNQDDFESVLTGY
YNSIRRSKMPALGRKRRGKKLGLGNSGTVECTENSKDGAAFLAVCRGKVSEGIDFSDENA
RAVIIVGIPFPNINDIQIAQKKKYNDTYKSSRNLLSGSEWYCQQAFRALNQAAGRCIRHR
FDYGAVILLDERFREERNIAYISKWLRKSMRQYDSFDKSVEELKYFFRDAKERVGKEAFN
TVQNSDINLEKIAAADQGKRFTRNKNQKVNKASKCGLKLASNGMMGMEKTATLCQSPTCS
TKYDATFVSSKSVDDVEVQASVLTDVKQTSSCREYVDLDCSQKNFRFSGALSMPFTHEDP
EVFIVKETPGMGGSPTLTSPASFSRDENSSSTIIQAPTEFADQLLLHSPSPSPSNSNAGR
FAYTCSLVTPEKYVTADANSVLAETESVLNLSVNSHTQKRRKSLGSTFVNPIQVEQFDAP
DSKTPGHDSFMASSRTSKYTNLRTESGLETGCSQNEFKRFNTSTRSSSHAMDKRLQILCS
ICRNQLGLPENHWYVRCSITSSSKGHLVTLLKGRFEVPVENASTGIPVVISDVSSVDQRL
CNRTQGAPGQGIWSGEDGCVFNTIFCPFCNSPDNCLGAQVMATDASNVHLLNKILFYLDR
LEIKNLEVSSKEKDSSPVSDSDFRNSAVPISIEKFSYIPLEEKSEGWRTKRSKIQLPSDG
RARRQDFKAI
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcaaccccgatgagaaatccaaggaaaaattcacaccacatcggcggcatc
gcagttgaattcccgtaccagccctacggttcgcagatggcgttcatgggcagagtcata
tcgacgctcgatcgcgctcagagggacggccactgccacgccttactcgagtcgccgact
ggtaccggaaaatcgctctcgcttctttgctcggttctcgcttggcagaagaactaccaa
tcaaggaattttggcaacgatcccgctcacttgacgcctgctcctgaggcaaagaccgat
cccctaggtcacggcggcggatttattcccgaaacgcagccttcaggtcttccatctgcg
acaaacattaagagttcaaagaagaagacagtgcctactattttctatgcctcgaggaca
cactcacaaattactcaggtgatccgtgaatacaggaaaacaacttatcgggtgccaatg
gcagtgttggcatcaaggaagcattactgcacaaacaggcacgtgcatggcaaagacaat
attgatgaagaatgtaagttgcttttgaacgaccgagtagtagggtgctcagaattcaaa
aatgtgcataaagtcaaaggtcactcgtctctgaataaaggaggttccctcgaggtccat
gatatcgaagatcttgtgaaagttggtcaagagatgaaaggttgctcctattttgccgca
cgttctatggcagaagatgcacaattagttttttgcccatacagctaccttgttaatcca
gtcatccgcaaagcaatggaagtggatattagaggggccattcttattctcgacgaggca
cataatatagaagacattgctcgtgatggaggtagtgtgaatgttgacgaagatgttttg
cataaactgcagacggagctagggcaattgacttttgttaatccaacgatttaccaacct
ttgaatgaaatgatacaggacataactagttggatggaacggaggaaaagttccttagaa
aagcgtgagtttcagcattacttttcatgttggagtggtgataaggctttaagggaactc
caagaagcaaacatttcacggcattgcttccctatattacaagaatgtgccacaaaggca
atcaaagctgcttcagatgcagagctagagatagcccatttaactggcatgtcggctaca
acattggaagggttgttctcttcacttagttacttcttctctgggaatggggcccacata
catgattatcagcttgtgttacaacgatatgttaaaagagatgctggaaatgttggtgca
ggctggacaaatacaatgagtttgtggtgcttgaatccagctgttgttttcagagatatt
gctgatctttctttatcagtgattctaacgtctgggaccctatcaccaatgaactccttt
tcatctgaactaggggttcagtttggaacttgtctggaagctccacacgtaatagatgtt
gagtcacagctgtgggctgccgtaatctctactggcccaggtaattatccattgaatgct
agttataagacagctgatggatatgccttccaggatgcactgggcatgtctttggaggaa
atatgcaagattgttcctggtggttctcttattttcttccctagttataagttgatggat
aaactatgcaatcgttggcgtgaaacaggtcaatggtctcggctaaatgctcagaaatcc
ctttttgttgagccaagaggaggaaaccaggatgattttgagtctgttttgacgggttat
tacaattcaattcgccgaagcaaaatgcctgctcttggaagaaaaagaaggggtaaaaaa
cttgggcttggtaacagtggaacagtggagtgcacagagaactccaaggatggagctgct
tttctagcagtttgccgaggaaaggtttcagaaggcattgacttctctgatgaaaatgct
agagcggttattattgtgggcattccctttccaaacataaatgatattcaaattgctcaa
aagaagaaatacaacgacacatacaagtcatctagaaaccttctaagtggaagcgagtgg
tactgtcaacaagcctttcgagctctcaatcaagctgcgggacgttgcatacgacatagg
tttgactatggagccgtcattttacttgatgagcgttttcgtgaagagaggaatatagca
tatatatcaaagtggcttaggaaatccatgagacagtacgacagctttgataaatcagtt
gaggaattgaagtactttttcagggatgctaaggaacgggttggcaaggaggcttttaat
actgtacagaattccgatattaatttggagaagattgctgctgcggatcagggaaaaagg
ttcacaagaaataaaaatcagaaagttaacaaagctagtaagtgtggattaaaattagct
tcaaacggaatgatgggaatggaaaaaactgccacattatgccagtctccaacttgtagt
acaaagtatgatgctacttttgttagttcaaaatctgtagacgatgtggaagtccaagca
tctgttctaacagatgtaaaacaaactagcagttgcagagagtatgttgacctagattgc
agtcagaaaaatttcaggttctctggggctttatccatgccatttacccatgaagatcct
gaagtattcattgtcaaggaaactcctggtatgggtggcagtcccactctaactagtcca
gcatccttctccagggatgaaaactctagttcaacaataattcaggcccctactgagttt
gcggaccagttgttattacattccccatccccatccccatcaaattcgaatgcaggtcgt
tttgcatacacttgttcattggtcactccagaaaaatatgtcactgcagatgcaaacagc
gtattagccgaaacagaaagtgttttgaatttgagtgtcaattctcatacccagaaaagg
agaaagtctttagggtcaacatttgttaacccaatccaagttgaacagtttgatgctcct
gattccaaaactccaggacacgatagttttatggcaagctcaaggacatctaaatataca
aatctcagaaccgaatctggtttggagactggctgttcccaaaatgaattcaagaggttc
aatacatcaaccaggtcttcaagtcatgctatggacaaaagactgcaaatcctttgctca
atctgcaggaatcaattgggtcttcccgaaaaccactggtatgttagatgctccataact
tcctcatcaaaaggtcacttggtaactcttctgaaaggaaggtttgaagttcctgtggag
aatgcatcaactggtatacctgttgtgatatctgacgtatcatcagttgatcagcgtctt
tgtaatagaactcaaggtgctccaggacagggaatttggagtggagaagatggctgtgta
ttcaatactattttctgccccttctgcaatagccccgacaattgtctcggtgcacaggtc
atggcaactgatgcatcaaatgttcatttacttaacaagatattgttttatcttgatcgt
ttggaaattaagaacctagaagtgtcgtcaaaggaaaaggattcatcaccagtaagtgac
tcggattttagaaattctgctgttcccatttcaattgaaaaattctcatacatcccgcta
gaagagaagtcagaaggctggagaactaaaagatcaaagatccaattgccaagcgacggc
cgcgctcgtagacaagattttaaggcaatatga
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