Actinidia eriantha (wild kiwifruit): 130776938
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Entry
130776938 CDS
T09464
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130776938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130776938
03009 Ribosome biogenesis [BR:
aew03009
]
130776938
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130776938
Spliceosome [BR:
aew03041
]
Complex A
U1 snRNP components
U1 related factors
130776938
Complex B
130776938
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
Helicases
130776938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
130776938
NCBI-ProteinID:
XP_057491180
LinkDB
All DBs
Position
5:complement(15076213..15086458)
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AA seq
774 aa
AA seq
DB search
MMTTATVSSAGPRYAPNDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPKALAHSGSA
PPQKPSSAPLISSVPVQQSSLGQPRDSSYNDDDDRNSRGSGSKLASGTKSYQSGKGDSHN
VGNGSSAESYRRQHEITVTGDNAPPPFTSFDATGFPSELLREVRQAGFSAPTPIQAQSWP
IALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRCRNNPQMGPTVLVLSPTRELATQIQDEA
VKFGKSSKIICTCLYGGAPKGPQLRDLYKGADVVVATPGRLNDFLEMKKVNLHQVSYLVL
DEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRKIAADLLVNPVQVNIGNVDE
LVANKSITQYIEVLLPMEKHKRLEQILRSQEPGSKIIVFCSTKKMCDQLARNLNREFGAD
AIHGDKSQADRDHVLSQFRSGRSPVLVATDVAARGLDVKDIRVVINYDFPTGIEDYVHRI
GRTGRAGATGEAYTFFGDQDSKHASDLIRILEGANQRVPVELRDMASRGGGMGRARRPWG
SGSGGYDAGRGGRNDSLGYGRMEGGRGSWGIPERSGLGSDHDSRDSFNDGVDGPDSYQQM
SFHERMIQAGGGARARSRSRSPNKGSGWGDNPGRARSRSRSRSADRFDTAPPAREHSPVR
SFHKYMMEQAQSPQRQQVLPHSSDTARGFTSSVVRQTHSGERSQSPCDDAPREWEGSTNA
EQNNEGYANGEPCSSHVGVEEKEGMIQADEEGGMIPRDDSMFQATSEDPRPSSL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgatgactactgcaactgtctcttctgctggtccacgttatgctcctaatgatcccact
ctgcccaagccttggaaaggtcttgttgatggtaaaactggttatctttacttttggaat
ccggagaccaatgttactcagtacgagaggccaaaggccttggcacactctggctcagct
ccaccacagaagccgtcctctgcacctttaatttcttccgttccagttcaacaatcttct
ctaggacaacctcgtgacagtagttacaatgatgatgatgatagaaatagcagaggtagc
gggtcgaagcttgcttcaggaacaaagagttatcagagtgggaaaggcgactcacacaat
gttggaaatggttcatctgcagaatcttatcgacgtcagcatgaaataactgttactgga
gataatgcgccccctcctttcacttcgtttgatgctactggttttccatcagagcttctt
agagaggtacgccaagctgggttctctgcacctactccgatacaggcacaatcatggcct
attgctcttcaaagtcgtgacattgtagctattgccaagacaggttcgggtaaaacctta
ggttacctaattccaggatttattcatctcaagcgctgccgcaataatcctcaaatgggc
ccaactgttttggttttgtcaccgacgagggaattggctacgcagatacaggatgaagca
gtgaagtttggcaagtcatcgaaaataatttgcacgtgtttgtatggaggagcaccaaag
ggtccccaattaagagacttgtacaaaggtgcagatgtggtggttgccactcctggccgt
ttgaatgattttttagaaatgaaaaaggtgaacctccatcaagtctcttacttggtgtta
gatgaggcagaccgcatgctggacatgggttttgaaccacagatacggaagatagtgaag
gaggtgcctactcgccgccagacccttatgtacactgcaacatggcctaaggaggttcgc
aaaattgctgctgatctactggttaatcctgttcaggttaacattggaaatgttgatgag
cttgttgccaataagtctattacccagtatattgaagtcttgttgcccatggagaaacac
aagcggcttgagcagatactgcggtcacaagaaccaggatcaaagatcattgtgttttgt
tccaccaagaagatgtgtgatcaacttgctcgtaatctaaaccgtgagtttggagctgat
gccattcatggagataaatctcaggctgatagggatcatgtgttgagccagtttcgatct
gggaggtctccagtgctggtagccactgatgttgctgctcgcggattagacgtcaaagat
atcagggtggttatcaattacgacttccctacaggtatagaggactatgttcacagaatt
gggaggactgggagggcaggtgctactggagaggcttacactttttttggcgaccaagac
tcaaaacatgcttcagatctcattagaattttggaaggagcaaaccagcgtgttccagtt
gaacttcgggatatggcgtcacgtggcggaggaatgggcagggctagacgtccatggggt
tctggctctggtggatatgatgcaggccgtggtggacggaatgactcgttggggtatggt
agaatggagggagggaggggaagttgggggattccagaaagaagtggattgggttctgac
catgattcccgggacagtttcaatgatggtgttgatggtcctgatagttatcaacaaatg
agcttccatgaaaggatgattcaagctggtggtggtgctcgagctcgcagccgaagtaga
agcccgaacaagggttcaggatggggtgacaacccgggcagggctcggagtcggagccgg
agccgtagtgccgacaggtttgacacggctccaccagcacgtgaacattccccagtgcgc
agtttccataaatatatgatggagcaggctcaatcgccccaacgccagcaggtgttgccc
cacagcagtgacactgctaggggattcacaagttctgtggttcgacagactcattctgga
gagcgatcgcagtctccatgtgatgacgctccgagggaatgggaaggatcaacaaatgct
gagcagaacaatgaaggatatgccaacggggaaccttgttcttcacacgtgggggtggaa
gagaaagaaggcatgattcaagcggatgaggagggaggtatgatccctcgggatgatagc
atgtttcaagcaaccagcgaggatcctcgcccctcttctctgtaa
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