Actinidia eriantha (wild kiwifruit): 130778583
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Entry
130778583 CDS
T09464
Name
(RefSeq) syntaxin-43-like isoform X1
KO
K08489
syntaxin 16
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130778583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aew04131
]
130778583
Membrane trafficking [BR:
aew04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
130778583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
EF-G-binding_N
DUF16
ZSWIM1-3_C
MCPsignal
DltD
EFL1
DGKD_4H
Motif
Other DBs
NCBI-GeneID:
130778583
NCBI-ProteinID:
XP_057493082
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All DBs
Position
6:12430820..12437977
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AA seq
320 aa
AA seq
DB search
MATRNRTILYRKYRDALKSVRVPSGSSPSSSGGPVIEMSSTSLLNPNHSYAPLSTEDPGS
SSKGALTVGLPPAWVDVSEEIAVNVQRVRTKMAELAKAHAKALMPSFGDGKEDQRRIEAL
TREITDLLKKSEKRLQRLSAGGPSEDSNIRKNVQRSLATDLQSLSTELRKKQSTYLKRLR
QQKEGSDGIDLEMNLNGNHTRREDDDFDDMGFTDHQMAKLRKSEAFTAEREKEIQQVVES
VNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVAASVEEGLKQLQKAERTQKQGGMVMCAT
VLVIMCLIMLVLLILKEIVF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaataggaccatactgtacaggaagtacagagatgcgttgaagagcgtt
cgggttccatcgggatcttcgccgtcatcgtctggaggtccggtgattgaaatgtcatcc
acttcgcttctcaatcccaatcactcgtatgctcctctcagtactgaggatcccggaagc
tccagtaaaggtgcacttacagtgggtctacctccagcttgggtggatgtatctgaagaa
atagcagtgaatgtgcaacgtgtgcggacaaaaatggctgagctagcgaaggctcatgcc
aaggcattaatgccctcatttggagatggtaaagaagatcaacgaaggattgaggctctt
actcgagagataactgatcttttgaaaaaatcagaaaagaggttacagagactttctgct
ggtgggccttccgaggactctaatatcaggaaaaatgtgcagcgctctctcgccactgac
cttcagagcctctctactgaacttcgcaagaaacagtcaacttatttgaagcgcctccgg
cagcaaaaagagggttcagatgggattgatttagaaatgaacttaaacggaaatcatacc
agaagagaagatgacgacttcgatgacatgggttttactgatcatcaaatggctaaacta
aggaaaagcgaggcattcacagcagaaagggagaaagagatccagcaggttgtagaatca
gtaaatgagctagctcagattatgaaggatctatcagtgctcgtcattgaccagggcact
attgtggataggatagattacaacattcagaatgttgcagcatcagttgaggagggcctt
aaacagctgcagaaggcagagagaacacagaaacaaggggggatggtgatgtgcgctacg
gttctcgtcatcatgtgcttaatcatgttagtcctcctaattctcaaggaaattgtcttt
tga
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