Actinidia eriantha (wild kiwifruit): 130779405
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Entry
130779405 CDS
T09464
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130779405
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130779405
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130779405
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
rpo30_N
Motif
Other DBs
NCBI-GeneID:
130779405
NCBI-ProteinID:
XP_057494009
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All DBs
Position
6:3576067..3589487
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AA seq
1168 aa
AA seq
DB search
MSTLSILSLPHTYHAFSPNKTLPFLHPKTPILIIGLGFCRLKPLRTSPQFPASYKFPRSL
FPSENRLSDADEEDDDDDEAADEYEDVSGEVSVDDEQSDDEFEGSDDDAPEPKSRFEEFK
WQRVERLRGEVREYGAEIIDVDELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKT
LVAEAAAVATVARGKRLFYTTPLKALSNQKFREFRDTFGDKGVGLLTGDSAINKDAQVLI
MTTEILRNMLYRSVGMVSSESGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLI
CLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLPLLDEKEKSMNRQL
SLNYLQLYSSGIIPDKDEGSRRRFSKKRESNISSNTNANMNRRSLSKNDINTIRRSQFLT
FQVPQVIDTLWHLHSRDMLPAVWFIFSRKGCDAAVQYLEDCKLLDECEIGEVELSLKRFR
IQYPDAVRESSVKGLLRGAAAHHAGCLPLWKSFVEELFQRGLVKVVFATETLAAGINMPA
RTSVIASLSKRSESGRIQLSSNELLQMAGRAGRRGIDERGHVVLVQSAYEGAEQGCKILF
SGLEPLVSQFTASYGMVLNLLAGGKITRRSNESDDMKVSRAGRTLEEARKLVEQSFGNYV
GSNVMVAAKEELSKIQNEIGMLTSDISDEAIDTKSRKLLTGLAYKEIADLQEELRVEKRV
RTEMRRRMEIERMSALRPLLEELEDGHLPFMSLQYIDAEGVQHLVSAVYLGKVNSLDGSK
VKNMVYTNDSFALNVVGSGDSERQHIDLSYYVALGSDNSWYLFTEKWIKALYKTGFPNVA
LAQGDALPREIMRMLLDKDEMQWQKLVDSELGGLWCMEGSLDTWSWSLNVPVLNSLSEDD
EVLQFSQAYRTAVESFKDQRNKVSRLKKQITRTEGFKEYKKILDMAKYTEEKIRRLKARA
NRLINRIEQIEPSGWKEFVKVSNVIHEARVLDVNTQMIFPLGETAAAIRGENELWLAMVL
RNKILLGLKPAQFAAVCGSLVSEGIKVRPWKNNSYIYEPSTTVIEVINFLDEQRSSLLQL
QEKHGVSIPCCLDTQFSGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKL
PDIDPLLQSNAMIASNVMDRPPISELAG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagcactctctccattctatcccttccacacacctaccacgcattttctccgaacaaa
acccttccttttcttcatcccaaaacgcccattctaatcatcgggctagggttttgccgc
ctcaaaccacttcgcacatcaccgcaatttccagcctcctacaagttccctagatcacta
tttccgtcggagaatcgactctccgacgccgacgaagaggacgacgacgacgacgaagca
gctgatgagtacgaagatgtctccggtgaagtttcggtcgatgatgaacagagcgacgat
gaatttgaaggctcagatgatgatgccccggagccgaagtctcggttcgaggaattcaag
tggcagagagttgagaggctacgcggcgaagtcagagagtacggtgcagaaataattgac
gttgatgagctcgcttcgatttacgatttccgcattgataaatttcagcgattggcgatt
caagcgttcttgagaggttcatcggttgtagtgtctgcgcctaccagcagtggcaagact
ttggttgctgaagctgcggcggttgccacagtagccagaggaaagagattattctatact
actcctcttaaggcattatcaaatcagaaattccgagagtttcgtgatacatttggtgat
aaaggtgttggtcttcttactggagattctgctatcaacaaagatgctcaggttctaatc
atgactactgagattctgcgcaacatgttgtatcggagtgttgggatggtttcatctgaa
agtggactttttcatgtcgatgtgattgtgttggatgaagtgcattatctaagtgacatc
tctcgcggtacagtttgggaagagatagttatttattgcccaaaggaagttcagctcata
tgtttatccgcaacagttgcaaatccagatgaattagctggttggattggtcagattcat
ggtaaaacagagttagtgacatcatccaaacgtccagttccattgacttggcacttctcc
acaaagacatctttgttacctcttcttgatgagaaagaaaaaagcatgaataggcagctg
tcactgaattatttacaactttattcatctggaattatcccagacaaggatgagggatct
agaagaagattttcgaaaaaacgtgagagcaacataagcagcaatactaatgctaatatg
aatcgacgatctctatcaaagaatgacataaacaccattcgccgctcacaatttctgact
tttcaggttcctcaagttatcgacacattgtggcaccttcactcaagggatatgctacca
gcagtttggtttatttttagtaggaaaggatgtgatgcagctgttcagtatcttgaagat
tgcaaactcctagatgagtgtgagatcggcgaggttgaactgtccttgaagaggttccgc
attcagtatcctgatgctgttagggaatcttcggtgaaaggacttctgcgaggggctgct
gcacaccatgctggatgtctgcccctttggaagtcatttgtggaagagttgtttcaacga
gggcttgttaaggttgtttttgcaacagaaacacttgctgccggtatcaacatgcctgct
aggacatctgttattgcatctctcagcaaaaggagtgagagtggacgaattcagttaagt
tcaaatgagttgcttcaaatggctgggcgtgctggacgaagaggcattgatgaaaggggt
catgtagttcttgtgcagagtgcatacgagggggctgaacaaggctgcaagattctcttt
tctggacttgaacctcttgtgtcacagtttactgcctcctatgggatggtgttaaatctt
cttgcaggtggaaaaattactcgtagatcaaatgaatcagatgacatgaaagtttcccga
gcaggacgaactctggaagaagcaaggaagttggttgaacagagctttggaaattacgtg
gggagtaatgttatggttgctgcaaaagaggagcttagtaaaatacagaatgagattgga
atgctcacttcggacatcagtgatgaagccattgatacaaagagccggaaattattaaca
gggttggcatataaggaaattgctgatcttcaggaagaactgagggtagaaaaacgtgta
cggactgaaatgcggaggaggatggaaatagagagaatgtctgctctgagacctctcctg
gaagagttggaagatggacacttaccttttatgtctttacaatatattgatgctgaagga
gttcagcatttagtctcagctgtttatttggggaaggttaattctctagatggttcaaaa
gttaagaacatggtttataccaatgattcatttgcattaaatgtagtagggagtggtgac
agcgaaaggcaacacatcgatttgtcttattatgtagcgctcggttcagataattcttgg
tatcttttcacagagaagtggatcaaagcactgtataaaaccggcttccctaatgttgcc
ttggctcaaggtgatgctttgcctcgagagattatgaggatgctacttgacaaggacgaa
atgcagtggcagaaacttgtggactctgaacttggtggtttatggtgcatggaaggatct
ttagatacgtggtcttggagtttaaatgtgcctgtcttgaatagtctttctgaagatgat
gaggttctacaattttcacaggcataccgtactgcagtagaatcttttaaggaccaaaga
aacaaagtttcacgtttgaagaaacagattactcgtacagaaggctttaaagaatataaa
aagatcttagacatggctaagtacactgaggaaaaaattcgacgcttgaaggctagagca
aaccgcctgataaaccgaatagagcaaattgagccatctggctggaaggagtttgtgaag
gttagcaatgtaatacatgaagcgagggtattggatgtcaatacacaaatgatatttcca
cttggtgaaactgcagctgcaattcgaggagaaaatgaactctggcttgctatggttctt
cgaaataagatcttactaggtctaaagcctgcacagtttgctgctgtctgtggaagttta
gtttctgaagggattaaagttcgtccttggaaaaataacagctatatctatgaaccttcc
accaccgtgatagaagtcatcaactttttggatgaacaaagaagctctcttctacaactt
caggaaaagcatggtgtgagtataccgtgctgtttggacacccaattttctggcatggta
gaagcctgggcttctgggttaacctggcgggaaattatgatggattgtgctatggatgat
ggagatctagctcgcctcttacggcgtactattgatttattagctcagattcctaaattg
cctgatattgacccattgttacaaagcaatgcgatgatcgcttccaatgtcatggaccgc
ccaccaattagtgaactagctggatga
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