Actinidia eriantha (wild kiwifruit): 130779651
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Entry
130779651 CDS
T09464
Name
(RefSeq) endoribonuclease Dicer homolog 3a isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aew03036
]
130779651
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130779651
microRNA pathway
RISC loading complex
130779651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
DEAD
ResIII
Helicase_C
PAZ
SWI2_SNF2
SNF2-rel_dom
dsrm
CbiG_C
Motif
Other DBs
NCBI-GeneID:
130779651
NCBI-ProteinID:
XP_057494355
LinkDB
All DBs
Position
6:13186150..13218872
Genome browser
AA seq
1659 aa
AA seq
DB search
MHSPEAIINPRKRNFQTMNSKPHDFRPREYQKKMFEIAMRRNTIAVLDTGAGKTMIAVMM
IKEIAASLNLSAHKKLIIFLAPTVHLVHQQFEVIKFHTDFRVEEYYGAKGVDEWKVDDWE
KEINEHDILVMTPQILLDALRKAFLSFERLSLMIVDECHRATGNHPYTKIMQDFYHKSRS
KPKIFGMTASPVIRKGVSSIMDCEEQISELEGILDSQVYTIEDRTELEKIIPSAKEICRF
YDPAVSINMDLKAKLETLWEKFDASLLELQGSMPSQFRDTEDKYKALRKRLSNDHAKILY
CLEDLGLLCAYEAVKVCLENARNVTEEYEFYRKSSLQSKYFLEEVLSAVNTSLPHGNEIF
WDIGSDFSKTVATGYISPKFYELLQIFQSFGEARQVLCLIFVERIIGAKVIERVIRRITY
LSHFTFSYLTGSNSSVDALAPKVQKETLESFRSGKVNLLFSTDVIEEGIHVPNCSSVIRF
DLPKTVRSYVQSRGRARQNDSQFIMMLERGNIKQRDQIFDIIRSEYSMTDTAVNRDPEAC
IFRACTIKETNAYYVDATGASVTADSSVNLIHRYCEKLPRDKYFTPKPIFQFLLSGESYQ
CKLTLPPNAAFQTLIGPPSKNSHLSKQLACFDACKKLHQMGALNDHLLPFNDEPSESDST
SKSRESTSGAGTTKRKELHGTTCVRSLSGTWGLNHDATIFHAYRIHFSCNKPDEQYSNFV
LLIESKLDDDVGNVEVELYLVSKFVKSSVSSCGQMHLDAEQVMKAKCFQELFFNALFGKL
FVRSKSFGGERKFLMQSGNASLWDQSNMYLLLPVESSNVSTHESWRINWMAINSCVTVVD
YMKKNAWLSVKQSSGDNVNSSLHRTDSIETIKNVIHLANKSVDSENLRQMVVLAIHTGRL
YSVLYVVDDTSAESPFDGNSDANPSSYSSFAEYFYKKYGIVLMHPGQPLLLLKQSHNAHN
LLVDFKNEAGASCGKRFEAGSKMVVKKPQTHVHMPPELLVSVDVPIGVVKSFYLLPSLMH
RLESLMLASQLREDISCLDSNFRISSSLILEAITTLRCTESFSMERLELLGDSVLKYAVS
CHLFLKYPKKHEGQLSTRRSWAVCNATLHKLGIDRNLQGYIRDGAFDPRRWVAPGQRSLR
PYPCSCGVDTLEVPLDSKFQTEDTKIIVGKCCDRGHRWMGSKTISDCVEALIGAYYVGGG
LTAALQLMKWLGIDAELDPSLVDEAIRTASLHSYIPKAKEIEVLESKLSYKFSIKGLLLE
AITHASEQELGVSYCYQRLEFLGDSVLDILITWHLYQSHTEIDPGELTDLRSASVNNDNF
AHAAVKRDLHQHLQHCSGFLLGQITEYVKSVADSQATTKSFQSMNAPKALGDVVESIAGA
ILIDTKLNLDEVWRIFKPLLSPIVTPDKLELPPLRELIELCDSLGYFIKETCIKNGEMVH
AELRLQLKDVLLLGEGFGHNRKSAKGQAAVHLLKDLEKRGISSSKRRKQDHDGVGVPCTP
DLGNDCFGQTNSDSSELVAQKKQKITINGLHSEANTNSSRINECSGTSCDSIPVLSSIDR
KKGGPRTSLFDLCKRLQWPIPTFKSTELKSRTPIEFCEGSERRTGFNSFTSKITLTIPDF
GVIELTGDPRADKKSSYDSASLLMLYELGRQGKVIIGGG
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgcattctccggaggcaatcatcaaccctcggaagagaaacttccaaaccatgaattcg
aagccacacgatttccggccgagagagtatcaaaagaagatgtttgaaattgcaatgcgg
cgaaacacgatcgcggtgttggacactggtgctggcaagactatgattgcagtgatgatg
atcaaagaaatagctgcatctcttaatctctctgctcacaagaaattgattatattcttg
gcccccactgttcaccttgttcaccagcaatttgaagttataaagtttcacacagatttt
cgagtggaagaatactacggagccaagggggttgatgagtggaaggtggatgattgggaa
aaggaaattaatgaacatgatatattggttatgacaccccagattttattggatgccttg
aggaaggcattcttgagttttgaaaggttatccttaatgatagttgatgaatgccatcgt
gccactggtaaccatccttacacaaaaattatgcaggatttttatcataaatctagaagc
aagccaaagatttttggaatgacggcctcccctgtaataagaaaaggtgtctcatccatc
atggattgtgaggagcaaatatcagaacttgaaggcatcctggactcccaggtttatacc
atagaagacaggacagaactggaaaaaattatcccctctgcaaaagaaatatgtagattt
tatgacccagcagtgtctatcaatatggatttgaaagcaaagttggaaacattatgggag
aagtttgatgcttcgttacttgagttgcaagggtcaatgccgagtcaattcagagatacg
gaggataagtacaaggcacttcgaaagcgactctcaaatgaccatgcgaagattttatat
tgccttgaggatcttggcctcctatgtgcttacgaggctgttaaagtttgtttggagaat
gctcgtaacgtaacagaagaatatgaattttacagaaaaagttctttgcagtccaaatat
tttctcgaggaagttttatctgcagtcaacacatcattgccacatggtaatgaaatcttt
tgggatatcggatctgatttttcgaaaacagtagctacaggctacatttctcccaaattt
tatgaactacttcaaatttttcaatcatttggagaagccagacaagtgttgtgccttatt
tttgttgaaaggattataggagctaaagtcattgaaagagtcataaggagaattacatat
ttatctcacttcacgttttcttatttgactggaagtaattcatcagttgatgcccttgca
ccaaaagtgcagaaagaaactctggaatcgtttcgctctggaaaggtcaacctattattt
tctactgatgtgattgaagagggtattcatgtaccaaactgttcctctgttatacgtttt
gacctgccaaagacagttcgtagctacgtccaatcacgtggacgagctcgtcaaaatgac
tcccagtttatcatgatgctcgagaggggaaacataaagcaaagggatcagatatttgat
attattaggagcgaatactctatgacagatacagcagttaacagagaccctgaggcctgt
atttttagagcatgcactattaaggaaacaaatgcgtattatgtggatgcaactggagca
tcagtaactgcagattctagtgtcaacctcattcatcgatattgtgaaaagctccctaga
gataagtacttcactccaaagcccatttttcagtttttgctgtcaggggagtcatatcag
tgtaaactaacattacctccaaatgctgcttttcaaactttaattggtcctccaagtaag
aattctcatttatcgaagcagcttgcctgctttgatgcatgtaagaaattgcaccagatg
ggagctcttaacgatcatcttcttcctttcaatgatgagccttcagaaagtgattccact
tcaaagagcagagaatcaacttcaggtgcaggaacaacaaagaggaaggaattacatggg
acaacctgcgttcgttcactatctggaacatggggattaaatcatgatgccactattttt
catgcctatagaatacatttctcctgtaataaacctgatgagcaatactcgaattttgtt
cttttgattgaatcgaaacttgacgatgatgtggggaatgttgaagtagaactttactta
gtttcaaaatttgtgaaatcttctgtttcttcatgcgggcaaatgcatttggatgcagaa
caggtaatgaaagcaaagtgttttcaagaattattctttaatgcgttatttgggaaatta
tttgttcgatccaaatcatttggaggagaaaggaagtttttaatgcagtcagggaacgca
tcattatgggaccaatcaaatatgtatctgctcctaccggtcgagtcttcaaatgtttct
actcatgaatcctggagaattaattggatggcaatcaactcttgtgttactgtggttgat
tatatgaagaaaaatgcttggttaagcgttaagcaatccagtggtgacaatgtaaattcg
tcacttcataggacggattcaattgagactatcaaaaatgtcattcacttggccaataaa
tcagttgattcagaaaacctgaggcaaatggtggtcttggcaattcatacgggaagactt
tactctgtcctatatgtggttgatgatacatctgctgaaagtccttttgatggaaactcg
gatgcaaacccttctagttattcatcctttgcagagtacttctacaaaaagtatgggatt
gtattaatgcatcctggacagcctttactgctgctaaagcaaagtcacaatgcgcacaac
cttcttgtggatttcaagaatgaagcaggtgcctcatgtggaaagagatttgaagcggga
agtaaaatggttgttaaaaagccccagactcatgtgcatatgccgccagaacttttagtc
agtgtcgatgtaccaataggtgttgtaaaatcattttacttgctaccatcattaatgcac
cgattggagtccctgatgttggccagccagctaagagaagatatttcttgtcttgatagc
aattttcggatatctagctcattgattctggaagctataacaactcttagatgtactgaa
agtttttccatggagcgcttggagttgctgggagattcagttttgaagtatgctgttagc
tgccacctctttcttaaataccccaagaagcatgaaggacaattatctactcggcgctca
tgggcagtttgtaatgcaactctacataaactgggaattgatcgcaatttacagggttat
atacgagacggtgcatttgatccccgtcgatgggttgctcctggacagcgatcattgcgc
ccttatccttgttcttgtggggtggatactttggaagttcctttggatagcaaatttcaa
actgaagacaccaaaattattgttgggaagtgctgtgacaggggtcataggtggatgggt
tccaaaactatatctgactgtgttgaagccctcataggagcatactatgtcggtggtgga
ttgactgcagcccttcagctgatgaaatggcttggtattgatgctgaacttgatccctca
cttgtagatgaagccattagaactgcatctctccactcctacatcccaaaagctaaagag
attgaagttctagagtcaaagcttagctacaagttctctatcaagggtctgctgttggag
gcaataacacatgcatctgagcaagaactgggggttagctactgttaccagaggcttgaa
tttcttggtgactctgtgttggacatactgatcacatggcatttgtaccaaagccacaca
gagattgatccaggggagttgacggacttgcggtcagcctcagtgaataacgacaatttt
gctcatgctgctgtgaaacgagatcttcatcagcatcttcaacattgctctggatttctt
ttaggtcaaattacagagtatgtgaagtctgttgctgattctcaagccaccacgaagtcc
ttccaaagcatgaatgctcctaaggctcttggagacgtggtggaaagtattgcaggggca
atacttattgataccaagctcaatctggatgaagtgtggagaatctttaaacctctatta
tctccaattgtgacccccgataagcttgaactgcctcctctgcgtgaattgatagaatta
tgcgactctcttggttactttataaaagagacttgtataaaaaatggagaaatggtacat
gctgagctcagattacagctgaaagatgtcttactgcttggagaaggatttgggcacaat
agaaaatctgcgaaaggacaagcagctgttcatttgttgaaggacctggagaagagagga
atttcatcctccaaaaggcgaaaacaagatcatgacggagttggtgttccgtgtacccca
gacttgggtaatgattgcttcggccaaacgaattccgactcttcagagctagtagcgcag
aaaaagcaaaagataactataaatgggttgcattcagaggcaaatacaaattcttcccgt
atcaatgaatgttctgggacatcttgtgattccatcccagttctttcatcaattgatagg
aagaaaggcggacctcgaacctccctttttgacctttgcaagagattgcaatggcccata
cctacctttaaatcaacagagctcaaatcaagaactccgattgaattttgtgaaggctca
gaaaggaggacgggtttcaacagcttcacatctaaaataaccctgaccatacccgacttt
ggtgttattgaactcactggtgatccaagggcagataaaaagagttcttacgattctgca
tctctcctcatgctttatgagcttggacgacaggggaaggtcatcatcggtgggggctga
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