Actinidia eriantha (wild kiwifruit): 130779695
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Entry
130779695 CDS
T09464
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130779695
03015 mRNA surveillance pathway
130779695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130779695
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130779695
mRNA cycle factors
P-body specific factors
130779695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
130779695
NCBI-ProteinID:
XP_057494428
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All DBs
Position
6:15105671..15122369
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AA seq
527 aa
AA seq
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MKGPLDRTKVVVRHLPPTISQSALAEQIDGRFAGRYNSVVFLPGKSRPKRQSYARVYIDF
KRPEDVIEFAEFFDGHVFVNEKGTQFRTIVEYAPSQRVPKHWSKKDGREGTIFKDPDYME
FLEFLAKPVENLPSAEIQLERREAERAGAAKDAPIITPLMDFVRQKRATKGGNRRSLSNG
KPTRKVHGGTYGSPSSASSRRGSDRKRISTSMYVLRDTAKNTSGKDKSTYTAVPNRHHHQ
LSDKSLALATASGTEVLEEENGIYGSTDTGKKKILLLKGKVKEIPHVSGGMPLQQNAKSF
KNSPGSSAPKQNQRHEASGRVIKSILLNKDARHSQSSSVVHSDQHSQSSNLEKDRRPPRP
QIQMFLKETNGGPEYKVVGNDLHGFSSEKQEKRTRNKDRPDRGVWTPLRYSDGSHASDES
LSSSACQSTQLQPDSVEGSHGEGKMDMSDARSGVTRTVGSGRSSSSSSYPPLDNGSHKHS
GRRGLVHNVKDDGSSIISDGKLLKRGGSSGYVPHEKQVWVQKSSTGS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtccgttagatcgaactaaagtggtggttcggcacttgccgccgacgatttcg
cagtcggcgttggcggagcaaatcgacggccgcttcgctggtcgctacaactcggttgtt
ttccttcccggcaagagcagaccgaagcgtcaatcatatgctagagtgtacattgacttc
aagaggccagaggacgtcattgagtttgctgagttctttgatgggcatgtttttgtcaac
gagaagggtactcaattcagaactattgttgagtatgctccgtcgcaacgcgttccaaag
cactggtctaagaaagatggtcgtgaagggaccatatttaaagatccagattacatggag
ttccttgaatttcttgcaaagcctgttgagaatcttcccagtgcagagatacaattggag
agaagggaagcggaacgagctggagctgcaaaggatgctcctataatcacaccgttaatg
gattttgttcgtcagaaaagagccaccaagggtgggaatcggaggtctttgtctaacggg
aaaccaactagaaaagtccatggaggaacgtatgggagtcctagttcggcttcatcaaga
cgaggttctgacagaaaaagaatttcgactagcatgtatgttttaagagataccgcaaag
aatacaagtggcaaagacaaatcaacatacactgcagttcctaatcgacatcatcatcag
ctttctgacaagtctcttgctttagctactgcatctggaactgaagtcttggaagaggaa
aatggaatttatggaagcactgatactgggaagaagaaaattctgcttttgaaggggaaa
gtgaaagaaattcctcatgtgtctggtggcatgccattgcagcagaatgcaaaatctttc
aaaaattcacctggttcaagtgctcccaaacagaaccagcgacacgaagccagtggaagg
gtaatcaaaagcatacttctcaacaaggatgcacgtcacagtcaatcatcatctgtggtc
cattctgatcagcattcccagtcctcaaatctggaaaaggacagaagacctcctcggccc
caaattcagatgttcttgaaggagacaaatggagggccagaatataaagtcgttggtaat
gatttacatggtttttccagtgagaagcaggagaaacgtacaaggaacaaggataggcct
gatcgtggtgtatggactcctcttcgctattcagatggatctcatgctagtgacgagtct
ttatcatcttcggcttgtcaatctacacagttacagccagattctgtggaaggaagtcac
ggagaaggcaaaatggatatgtcagatgcaaggagtggggtaaccagaacagttggaagt
ggacgtagcagtagcagtagcagttatcccccactagataatggttcccataaacacagt
ggtcgccgggggttggttcataatgtaaaggatgatggctcttctatcataagtgatggg
aaactcttgaagagaggaggttcttctggctatgttccccatgagaaacaagtatgggtt
caaaaatcaagcactggttcttag
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