Actinidia eriantha (wild kiwifruit): 130779958
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Entry
130779958 CDS
T09464
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03410
Base excision repair
aew03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130779958
03450 Non-homologous end-joining
130779958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aew03400
]
130779958
Enzymes [BR:
aew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130779958
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
130779958
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
130779958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
NTP_transf_2
BRCT
PTCB-BRCT
Cdd1
Motif
Other DBs
NCBI-GeneID:
130779958
NCBI-ProteinID:
XP_057494833
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All DBs
Position
6:complement(3196507..3203948)
Genome browser
AA seq
546 aa
AA seq
DB search
MAPKATKKRSTLSDPAGMFAGMVILLVENGVQPRRLQIWKQKLGQMGATIEDRLSKKVTH
VFAMNSDALLKQFDRERLSRVRGSLLLYKWLEDSLSSGEKSSEAPYILTLESGGGASSNK
TLEESDSKAANGHDSSNDTTSQNKRIKTSPADPKPASSKNTEDAVISDVYEAWKSDSGSD
NFSPTLGPVNSSPTTPDALTKIVGTADSSLTYNPPDQNQNVTEIFGKLVNIYRALGDDRR
SFSYSKAIAVIEKLPFKIETADQVKHLPAIGKSMQDHIQEILNTGQLSKLEHFETDEKVG
TISLFGEVWGIGPATALKLYEKGHRTLDDLKNEDSLTNAQRLGLKYFDDIKMRIPRHEVQ
EMDLLLQKAAQEVLPGVVVICGGSYRRGKASCGDLDIVITHPDGKSHRGFLRKYVKHLKD
INFLREDLIFSIHSEEGTDAGVDTYFGLCTYPGRELRHRIDLKVYPRDIHAFGLIAWTGN
DVLNRRLRLLAESKGYRLDDTGLFPATKSSSSKRGTRASASLHFTTEKEVFDFLGFPWLE
PRERNL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaggcaacgaagaagcgatcaacgctgtccgatccggcgggaatgttcgcc
ggaatggtaatactcctggtcgaaaacggagtccaacctcgtcgattacagatttggaag
cagaaactggggcaaatgggggctaccattgaagacaggctatcgaagaaggtcactcat
gtttttgccatgaattcggacgctcttttgaagcaatttgatcgagaacgcttgtcccgc
gtcagaggaagtcttcttctttacaagtggctagaggacagtctgagttcaggagaaaaa
tcatctgaagcgccatacatcctaacacttgagtcaggaggaggagcttcatcaaacaaa
actttggaggaaagtgattctaaagctgctaatggacatgattccagtaatgacacaaca
tcacagaataaaaggattaaaacttctccagcggaccctaaacctgcatcatccaaaaat
acagaggatgcagtaattagtgatgtatatgaggcatggaaatctgacagtggttctgac
aatttttccccaactctgggcccagttaacagcagtcctactacccctgatgctctaaca
aaaattgttggaactgcagactcatccttgacatataatccacctgatcaaaaccagaat
gtcactgagatatttgggaagcttgtgaacatatatagagcattgggtgatgaccggagg
tcttttagctattccaaggccattgcagttattgagaagctacccttcaaaattgaaact
gcggatcaggtcaaacacctacctgcaattgggaagtcgatgcaggatcatattcaggag
atattgaatacggggcagctttccaagttggaacattttgagacagacgaaaaggtgggg
acgataagtctatttggggaagtatggggcattggtcccgccactgcactgaaactttat
gagaaagggcatcgaaccttagatgatctgaagaatgaggattcattaacaaatgctcag
aggttaggattgaaatattttgatgatatcaaaatgaggattccacgacacgaggttcaa
gagatggacctacttctacagaaagctgcacaagaagttttgcctggggtggtggtaata
tgtggaggatcatacagacgtggaaaagcttcttgtggagatttggacattgtgattact
catcctgatggtaaaagtcatagaggcttccttcggaaatatgtaaagcatctgaaggat
ataaacttcttaagggaagatttgatctttagtattcacagtgaggagggtactgatgct
ggagttgacacgtattttggtctttgcacatatcctggtcgagagctgcggcatcgcata
gatttgaaggtttatccaagggacatacatgcatttggactaatagcttggacagggaat
gatgtgttaaataggagactcagattactagcagaatccaagggataccgacttgatgat
actgggctgtttccggccacaaagagttctagtagtaaacggggcacaagggctagtgca
agtttgcattttacgacagaaaaagaagtgtttgatttcctgggatttccttggcttgaa
ccacgtgagaggaatctgtga
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