Actinidia eriantha (wild kiwifruit): 130781015
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Entry
130781015 CDS
T09464
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130781015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130781015
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130781015
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130781015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF4857
Motif
Other DBs
NCBI-GeneID:
130781015
NCBI-ProteinID:
XP_057496045
LinkDB
All DBs
Position
7:complement(3791071..3791959)
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AA seq
280 aa
AA seq
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MEYYCSWKKPVIVRQVWAWNLHQEIAMIQHVLPYYRFASMDTEFPGVIFRPGTEKHQYSH
LSPTFNYRTMKANVDALKLIQVGLTFSDAAGNLPDLGTHYAHVWEFNFRDFDIDSDRQNP
ESITLLKNQGIDFKKNRDEGIDSKLFAFLLVRAGVVLNSQTAVTWVTFHGAYDFGFLIKL
LTQNDLPPNLPMFMQLMRIYFGGFVLDLKHMMKFCDGLCGGLEKLAKALNVDRVVGKSHQ
AGPDSLLTMQTFLRLRDTYFHGDGDQELAPFQSVLYGLEG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggagtattattgttcttggaagaaaccagtaattgttcggcaggtctgggcctggaat
ttgcaccaagaaattgctatgattcaacacgttcttccctactatcgattcgcatccatg
gacactgagttcccaggcgtgatttttcgtcccggaacagagaaacaccaatattcccat
ctttccccaaccttcaattaccgaacgatgaaggccaatgtggatgctctcaaactcatt
caagtcggcctcactttctctgacgccgccggaaacctcccggacttgggaacccactac
gcccacgtctgggaattcaattttcgggacttcgacattgattccgaccgccaaaacccg
gaatcaatcaccctcttgaagaaccaaggaatcgatttcaagaaaaacagggacgaaggt
attgactccaagctatttgccttcctgcttgtgagagccggtgtcgttttaaactcccaa
accgcggtcacgtgggtcaccttccatggcgcttacgattttgggtttctcatcaagctc
ttgactcagaacgatttgcctcccaacctccccatgttcatgcaattgatgcgtatctat
tttggtgggttcgtgcttgacctgaagcacatgatgaagttctgtgatgggctatgcggt
gggttggagaagttggccaaggcactcaacgtcgatcgggtggttgggaagagccatcaa
gccggtccggatagcttgctgactatgcagacattcttgaggcttagagacacgtacttc
catggagatggagatcaagaacttgctccattccagtccgtgttgtatggactggaaggt
taa
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