Actinidia eriantha (wild kiwifruit): 130781590
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Entry
130781590 CDS
T09464
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03410
Base excision repair
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
aew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130781590
03410 Base excision repair
130781590
03420 Nucleotide excision repair
130781590
03430 Mismatch repair
130781590
03440 Homologous recombination
130781590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aew03032
]
130781590
03400 DNA repair and recombination proteins [BR:
aew03400
]
130781590
Enzymes [BR:
aew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130781590
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
130781590
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
130781590
MMR (mismatch excision repair)
DNA polymerase delta complex
130781590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
130781590
NCBI-ProteinID:
XP_057496796
LinkDB
All DBs
Position
7:13199439..13229919
Genome browser
AA seq
1082 aa
AA seq
DB search
MNSKKRSLPQNHQPPLQQKHHASMAEEEDLDEDVFLDETLYEEESQVLRDMEEREALASR
LSKWKRPALSQPYMSQSQGVVFQQLEIDYVIGESHKELLPKSSGQAAIIRIFGVTREGHS
VCCHVHGFEPYFYISCPPGMGPDDISHFHQILEERMREVNRNSKVPKLVRRVEMVHRRSI
MYYQQLGTQPFLKLVVALPTMVTSCRGILDRGIQIDGLGMKSFITYESNVLFALRFMIDC
NVVGGNWIEVPVGKYKKSAKNLSYCQLEFDCLYSDLISHAPEGEFSKIAPFRILSFDIEC
AGRKGLFPEPTHDPVIQVANLVTLQGQDQPFVRNVMTLKSCSPIVGVDVMSFDTEREVLL
AWRDFIREVDPDIIIGYNICKFDLPYLIQRAEALGIPEFPMLGRVRNSRVRVKDTTFSSR
QYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLNEQKEDVHHSIISDLQN
GNSETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQL
LRKARQKNLVIPNVKQAGSEQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLC
YCTLVTPEDVRKLNLLPECINKTPSGETFVKSNLQKGILPEILEELLAARKRAKADLKEA
KDPLVKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEE
KFTTVGGYEHNAEVVYGDTDSVMVQFGVPTVEAAMNLGGEAADYISGTFINPIKLEFEKV
YYPYLLISKKRYAGLLWTKPDKFDKMDTKGIETVRRDNCLLVKNLVTECLHKLLIDRDIP
GAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNV
GDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPLLRIFEPILKNAS
KELLQGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALISNSDRTLCSHCKGREAELYCK
TVVNVSELEKLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLDRW
NF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaagaagcgatccttgccgcaaaaccaccaaccaccactgcaacagaagcac
cacgcctccatggcagaggaagaagatctggacgaggatgtcttcctcgacgaaaccctc
tacgaggaggagtcccaggttcttcgcgacatggaggagagagaagctctcgcctcgcgc
ctctccaagtggaaacgccctgctctgtctcagccgtacatgtctcagtcccagggcgtg
gtttttcagcaactggagattgattatgtgattggagagagtcataaggaattgttgccc
aagtcatctggccaggccgctattattaggatctttggggttaccagggaaggacatagc
gtttgctgccatgttcatggatttgagccatatttctacatcagctgccctccaggaatg
ggtcccgatgatatatcccacttccatcaaattcttgaggaaaggatgagggaagtaaat
aggaacagtaaggttcccaagcttgttcgccgtgtagaaatggtgcatagaagaagcatt
atgtactatcagcagcttggtactcagccttttttaaagcttgtagttgcattaccgaca
atggttaccagttgtcgcggcatccttgatagaggcatacagatcgatggtcttgggatg
aagagctttataacgtatgaaagtaatgttctttttgctcttcgtttcatgatcgactgc
aacgttgttggtggcaattggattgaagttcctgttggaaaatataagaagtcagcaaag
aatctgtcctattgccaattagagtttgattgcctttattcggatttgatcagccatgcc
ccggaaggagagttctcgaaaattgctccatttcgcatattgagctttgacatcgagtgt
gctggtcgtaagggtcttttccctgagcctacccatgatcctgttatccaggtcgccaat
ctagttaccttgcaaggacaagatcagccatttgttcggaatgtcatgacccttaagtct
tgctcaccaattgttggtgttgatgtgatgtcattcgatacagaaagagaagttttacta
gcttggcgggactttattcgtgaagttgatccggatataataattggatataacatctgc
aaatttgatttgccctatctcatacagagagctgaggctttgggaataccagaatttcca
atgcttggccgcgtcagaaatagcagggttcgtgtcaaggatacgactttttcttcaaga
cagtatggaacaagggaaagtaaagaagtaacagtggaagggagagttcaatttgacttg
cttcaggttatgcaaagggattataaattaagttcatattcgttgaattctgtgtcagct
cactttcttaatgagcagaaagaggatgtccatcattctattatatctgaccttcagaat
gggaactcagaaacacgaaggcggctagctgtctactgtttgaaggatgcctatctccct
cagcggcttttggacaagttgatgttcatttataattatgtagagatggctcgagtcaca
ggtgtccccatctcatttcttctttccagaggacagagtattaaggtgctttctcaactt
cttagaaaggcgagacaaaagaatcttgttattccaaatgtgaaacaggcaggatctgaa
caaggaacttatgaaggtgcaactgttttggaggccagggcaggattctacgaaaagcca
attgcaacattggatttcgcatctttatatccatcaatcatgatggcatataatttatgc
tactgcactctggtaacgcctgaagatgttcgcaaactcaatctcctgccagaatgtatt
aacaaaactccttctggtgaaacatttgtcaaatcaaatttacagaagggaatacttcca
gaaattcttgaagaactgttagctgctcgtaaaagagctaaagcggatttaaaggaagca
aaggatcctcttgtcaaggctgtgctagatggtcgccagctggctttgaagataagtgca
aattctgtatatggatttacaggagctactgtcggtcaattgccatgtttagagatatct
tcaagtgttacaagctatggtcgacagatgattgagcatacaaagaaacttgtggaagag
aaatttacgacagttgggggatatgaacacaatgctgaggttgtatatggagatacagat
tctgtaatggtacaatttggtgtgcctactgttgaagcagctatgaacttggggggggaa
gctgctgattacattagtgggacattcattaatcccataaaactagagtttgagaaggta
tattatccatatctactgattagcaagaagagatacgctggccttctatggacaaagccg
gacaagtttgacaaaatggatactaaaggcattgaaacagtcagaagggacaattgtctg
ttggttaaaaacctggtaactgaatgccttcataaattactaatagacagggacattcct
ggtgccgttcagtatgtcaaaaataccatctcagatcttctcatgaatcgcatggatttg
tctcttttggttattaccaagggtctgacaaaaacaggagatgattatgaagtaaaggca
gcacatgttgaacttgctgagcggatgcgtaagagagatgctgctactgctccaaatgtt
ggggatcgagtgccttatgtcattattaaagctgcaaaaggtgccaaggcttatgaaagg
tcggaggatcctatttacgtattggaaaataacatacctatagaccctcaatactacctt
gaaaatcaaataagcaagccacttttaagaattttcgagcccattttgaagaatgccagt
aaggaacttcttcaaggcagtcacacaagatccatctccatctcaactccttcaaacagt
ggcattatgaaatttgctaagaagcaacttagttgcattggctgcaaggctttaatcagc
aattctgatcgaactctgtgttcacattgcaaaggacgagaagctgaactctattgcaaa
actgtagttaatgtatccgaattagagaaactttttgggaggctgtggacgcagtgccag
gaatgtcaaggctctcttcaccaggatgtgttgtgcactagtcgggactgcccaatattt
tatcgaaggaagaaggcacagaaggacatggcagaagcgaagctccagttagatcggtgg
aatttctag
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