Actinidia eriantha (wild kiwifruit): 130781977
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Entry
130781977 CDS
T09464
Name
(RefSeq) polyadenylate-binding protein 7-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130781977
09123 Folding, sorting and degradation
03018 RNA degradation
130781977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130781977
03041 Spliceosome [BR:
aew03041
]
130781977
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130781977
mRNA cycle factors
Stress granule specific factors
130781977
Spliceosome [BR:
aew03041
]
Complex C
Other components
Complex C specific factors
130781977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
Nup35_RRM_2
RRM_occluded
RRM_Nup35
RRM_7
RRM_5
RRM_10
PABC_AtC3H46
IPP-2
Motif
Other DBs
NCBI-GeneID:
130781977
NCBI-ProteinID:
XP_057497237
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All DBs
Position
8:complement(2042399..2050374)
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AA seq
641 aa
AA seq
DB search
MAVPPTVVSATPASLYVGDLHYGVTDGQLFDHFAEYKSLASVRICRDFSTGRSLCYGYVN
FISAQDAIHAIEVKNHSVLYGKVIRVMWSHRDPDARRSGIGNVFVKNLGESIDNAKLQEM
FQNFGNILSSKVVMFDDGRSKGYGFIQFESEESANTAIEKLNGSSIGGKNIYVGKFLKRS
DRALPSPDIKYTNLYVKNLALDVTEELLKEKFSEFGKVISLVISKDDNGASRGFGFVNFD
SPDDARRALEAMNGLQLGSEVLYVSRAQKKAEREQILRRQFEEKRKEHIMKYQGSNVYVK
NIDDNVTDDELREHFSQCGTITSAKLMRDEKGISKGFGFVCFSSPEEANKALNTFHGFMF
HGKPLYVSIAQRKEERQAKLQLQYVRMAAELAGTSTIIPGGYPPLYYTSPHGVFSPIPPR
PGMMYQPLGLRPGWRANSFVPPIRSGFQPSQLPVIPNTPRQHRQNRGRMNGMNGNMLPQG
GDHTVSYVPVPHVQQPSQSATAKDSNNQQQVGQVRYVPNGRVREMNRANGVSSMVSGSVA
ASTEGSEMLSRLAAAPAEQQKQILGERLYPLVQNHKPELTSKITGMLLEMDNSELLLLLE
SPESLVAKVEEAEKVLNLSKTNVSSQDSLHSNYLSAGVAVN
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctccgacggtggtttccgctacaccggcgtcgctgtacgtcggcgacctc
cactacggcgtcaccgacggccagctcttcgaccactttgccgagtacaagagcctggcc
tccgtccgcatctgtcgcgacttctccaccggacgctccctctgttacggctacgtcaac
tttatctctgcccaagacgcgattcatgctattgaggtgaagaatcactctgtgttgtat
gggaaagtaataagggttatgtggtcacatcgtgatcccgatgctaggaggagtggaatt
ggaaatgtgtttgtcaagaatttgggcgagtcaattgacaatgcaaagcttcaagaaatg
tttcaaaattttggaaatatcttatcatccaaagttgtcatgtttgatgatggtcggagc
aaaggatatggctttatccagtttgagtctgaggaatctgcaaatactgccattgaaaag
cttaatggatctagtattggaggcaagaatatatatgttggaaagtttttgaaaaggagt
gatcgggctttgcctagtcccgatattaaatacacaaatttgtatgtgaagaatttggct
ctagatgtcacagaagaactccttaaagaaaagttctctgagtttggaaaagtcattagc
ttggttatatcaaaggatgacaatggggcatcgagaggttttggatttgtgaattttgat
agcccagatgatgccaggagggcattggaagctatgaatggtttacagcttggctccgag
gttttatatgtatctagggcacaaaagaaagcagaacgtgagcagattttgcgtcgtcag
tttgaggagaaacggaaggagcatatcatgaaataccagggttcaaatgtctatgtcaag
aatattgatgataatgtcactgatgatgagctgcgagaacactttagccagtgtggcacg
attacctctgcaaaactgatgcgagatgaaaaaggaatcagcaagggatttggatttgtt
tgcttctcctcacctgaggaagccaataaagccttgaacactttccatggtttcatgttt
catggaaagccactatatgtttccattgctcaaagaaaagaggagaggcaagctaagtta
cagcttcagtatgtgcgtatggcggcagaactagcggggacttcaactattattcctggg
ggatatcctcctctttactacacatctccccatggtgtcttttcaccaatacctccacgt
ccggggatgatgtatcagcctttgggtttgaggcccggatggagagctaatagttttgta
cctccaattagatccggttttcagccgtcacagcttccagtgattccaaacacaccaaga
caacataggcaaaataggggaaggatgaatgggatgaatgggaatatgcttccacaaggt
ggtgaccatactgtttcttatgttcctgttccacatgtgcaacaaccctctcagtcagcg
accgcaaaagattcaaacaatcaacagcaggtcggacaggtgaggtatgtgccaaatgga
cgtgtgcgtgagatgaacagagcaaatggtgtctcatctatggtttctggttctgtcgca
gcttcaacagagggctcagaaatgttgagcaggcttgctgctgctccggctgaacagcag
aaacagatactaggggagcgactttatcctcttgtccaaaatcacaagcctgaactcact
tcaaagataacggggatgctcttggagatggacaactcggagctgcttctcttattggag
tcaccggagtcgctggtggccaaggtagaagaagctgagaaggtgctcaacctctcaaag
acaaatgtctccagccaagactcacttcactctaattacctgtctgccggagttgcagtc
aactaa
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