Actinidia eriantha (wild kiwifruit): 130782734
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Entry
130782734 CDS
T09464
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130782734
09122 Translation
03013 Nucleocytoplasmic transport
130782734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130782734
03041 Spliceosome [BR:
aew03041
]
130782734
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130782734
Spliceosome [BR:
aew03041
]
Complex C
Other components
EJC/TREX
130782734
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130782734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Herpes_UL92
Motif
Other DBs
NCBI-GeneID:
130782734
NCBI-ProteinID:
XP_057498113
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All DBs
Position
8:545134..571559
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AA seq
607 aa
AA seq
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MDLFRRAILEPGPPEDFALKTVQEVIKPQKLTKLIQDENQLLENILRTLLQELVSAAVQS
GERIMEYGQSIVDGEVARGQIPRLLDIVLYLCEKEHVEAGMIFQLLEDLTEMSTMRNCED
IFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKEAPEGISIDFNFYKTFWSLQEHFCNPASLTLAPTKWQKFT
SSLTVVLNTFEAQPLSDEEGDANNIEDEAATFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKNDKDSPSEATKEEIKSCEDRVKKLLEMTPPKGKEFLTSIEHILERERN
WVWWKRDGCPPFEKPPIEKKSVQDGVKKRRVRWRLGNKELSQLWKWADQNPNALTDPQRV
RTPAVTEYWKPLAEDMDVTAGIEAEYHHKNNRVYCWKGLRFSARQDLDGFSRFTEYGIEG
VVPFELLPLDVRSKYQAKPNERSKRAKKEEIKGAAHQAEENQIATPASEIDVEGGRADLE
ASAAPMDTDAAITTGNISHGGSPDEQQKQGSDTDGGQEPGQIEADAETEAGLIDGEADAE
VDLDAVG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttcaggagggcaatattggagcccgggccacctgaagattttgctcttaag
actgtccaagaagtaataaaacctcagaagctaacaaagttaatccaagatgaaaatcaa
ttgttggaaaatattctacggacattacttcaagaattggtgtcagctgcagttcagtca
ggggagagaattatggaatatgggcaatctattgtcgatggggaagttgctcggggtcaa
attccccgccttcttgatattgtattgtatctttgtgagaaagaacatgttgaagctggt
atgatcttccagctattggaagatttgacagaaatgtcgacaatgagaaattgcgaagat
atctttggatatatagagagtaaacaagacatactgggaaagccggaattgtttgctcga
ggaaaacttgtcatgttgagaacatgcaatcaacttcttcgtcgcctatcaaaggcaaat
gacgtcgtgttttgtggacgaattattatgttccttgctcattttttcccattgtcagaa
cgctcagctgtcaatataaagggagttttcaacacttcaaatgagacaaaatatgagaaa
gaggctcctgaaggcatttccattgatttcaatttctacaaaaccttttggagtttacag
gaacatttttgtaaccctgcttccttaaccctcgctccgacaaagtggcagaaatttact
tccagtttaacggttgtgttgaatacctttgaagctcagcctttaagtgatgaagagggt
gatgctaataatattgaggacgaggcagcaacctttagcattaagtatctcacaagcagt
aaacttatgggcctggagttaaaagatccaagtttccgacgccatgttctcgttcagtgc
cttattttgttcgattatctgaaggccccagggaagaacgacaaagattcgccatccgaa
gcaacgaaagaagaaataaaatcttgtgaagatcgggtgaagaagcttcttgaaatgact
cctcctaaagggaaagaatttcttactagtattgagcatatattggaaagggaaaggaat
tgggtgtggtggaaacgtgatgggtgcccaccatttgaaaagccgccaatagagaagaaa
tcagttcaggatggggtgaaaaagcgtagggtacggtggagactggggaataaagaactg
tctcagttatggaaatgggcagatcagaatccgaatgctcttacagatcctcaacgtgta
cgcactcctgctgttacagaatattggaaacctttggctgaagatatggatgtaactgct
ggaatagaagcagaatatcatcacaaaaataaccgggtttattgctggaaaggactccgg
ttttctgctcgacaggacttggatggattttctaggtttactgaatatggtattgaaggg
gttgtgccttttgaacttctgccattggatgtgcggtcaaaataccaagctaaaccaaat
gagaggtccaaacgtgctaaaaaggaagaaataaaaggtgctgcacatcaagcagaggaa
aatcagattgcaacgcctgcaagtgagattgatgttgaaggaggcagagctgatcttgaa
gcatcagcggcaccaatggacactgatgcagcaataacaactgggaatatttcgcatggt
ggaagtccagatgaacagcagaagcaaggttctgataccgatggtggtcaggagcctggc
cagatagaagctgatgcggagacagaggcgggactgatagatggagaggcggatgcagaa
gttgatttagatgcagtaggctaa
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