KEGG   Actinidia eriantha (wild kiwifruit): 130782734
Entry
130782734         CDS       T09464                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03013  Nucleocytoplasmic transport
aew03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130782734
  09122 Translation
   03013 Nucleocytoplasmic transport
    130782734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130782734
   03041 Spliceosome [BR:aew03041]
    130782734
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     130782734
Spliceosome [BR:aew03041]
 Complex C
  Other components
   EJC/TREX
    130782734
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130782734
SSDB
Motif
Pfam: efThoc1 Herpes_UL92
Other DBs
NCBI-GeneID: 130782734
NCBI-ProteinID: XP_057498113
LinkDB
Position
8:545134..571559
AA seq 607 aa
MDLFRRAILEPGPPEDFALKTVQEVIKPQKLTKLIQDENQLLENILRTLLQELVSAAVQS
GERIMEYGQSIVDGEVARGQIPRLLDIVLYLCEKEHVEAGMIFQLLEDLTEMSTMRNCED
IFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKEAPEGISIDFNFYKTFWSLQEHFCNPASLTLAPTKWQKFT
SSLTVVLNTFEAQPLSDEEGDANNIEDEAATFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKNDKDSPSEATKEEIKSCEDRVKKLLEMTPPKGKEFLTSIEHILERERN
WVWWKRDGCPPFEKPPIEKKSVQDGVKKRRVRWRLGNKELSQLWKWADQNPNALTDPQRV
RTPAVTEYWKPLAEDMDVTAGIEAEYHHKNNRVYCWKGLRFSARQDLDGFSRFTEYGIEG
VVPFELLPLDVRSKYQAKPNERSKRAKKEEIKGAAHQAEENQIATPASEIDVEGGRADLE
ASAAPMDTDAAITTGNISHGGSPDEQQKQGSDTDGGQEPGQIEADAETEAGLIDGEADAE
VDLDAVG
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggatttgttcaggagggcaatattggagcccgggccacctgaagattttgctcttaag
actgtccaagaagtaataaaacctcagaagctaacaaagttaatccaagatgaaaatcaa
ttgttggaaaatattctacggacattacttcaagaattggtgtcagctgcagttcagtca
ggggagagaattatggaatatgggcaatctattgtcgatggggaagttgctcggggtcaa
attccccgccttcttgatattgtattgtatctttgtgagaaagaacatgttgaagctggt
atgatcttccagctattggaagatttgacagaaatgtcgacaatgagaaattgcgaagat
atctttggatatatagagagtaaacaagacatactgggaaagccggaattgtttgctcga
ggaaaacttgtcatgttgagaacatgcaatcaacttcttcgtcgcctatcaaaggcaaat
gacgtcgtgttttgtggacgaattattatgttccttgctcattttttcccattgtcagaa
cgctcagctgtcaatataaagggagttttcaacacttcaaatgagacaaaatatgagaaa
gaggctcctgaaggcatttccattgatttcaatttctacaaaaccttttggagtttacag
gaacatttttgtaaccctgcttccttaaccctcgctccgacaaagtggcagaaatttact
tccagtttaacggttgtgttgaatacctttgaagctcagcctttaagtgatgaagagggt
gatgctaataatattgaggacgaggcagcaacctttagcattaagtatctcacaagcagt
aaacttatgggcctggagttaaaagatccaagtttccgacgccatgttctcgttcagtgc
cttattttgttcgattatctgaaggccccagggaagaacgacaaagattcgccatccgaa
gcaacgaaagaagaaataaaatcttgtgaagatcgggtgaagaagcttcttgaaatgact
cctcctaaagggaaagaatttcttactagtattgagcatatattggaaagggaaaggaat
tgggtgtggtggaaacgtgatgggtgcccaccatttgaaaagccgccaatagagaagaaa
tcagttcaggatggggtgaaaaagcgtagggtacggtggagactggggaataaagaactg
tctcagttatggaaatgggcagatcagaatccgaatgctcttacagatcctcaacgtgta
cgcactcctgctgttacagaatattggaaacctttggctgaagatatggatgtaactgct
ggaatagaagcagaatatcatcacaaaaataaccgggtttattgctggaaaggactccgg
ttttctgctcgacaggacttggatggattttctaggtttactgaatatggtattgaaggg
gttgtgccttttgaacttctgccattggatgtgcggtcaaaataccaagctaaaccaaat
gagaggtccaaacgtgctaaaaaggaagaaataaaaggtgctgcacatcaagcagaggaa
aatcagattgcaacgcctgcaagtgagattgatgttgaaggaggcagagctgatcttgaa
gcatcagcggcaccaatggacactgatgcagcaataacaactgggaatatttcgcatggt
ggaagtccagatgaacagcagaagcaaggttctgataccgatggtggtcaggagcctggc
cagatagaagctgatgcggagacagaggcgggactgatagatggagaggcggatgcagaa
gttgatttagatgcagtaggctaa

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