KEGG   Actinidia eriantha (wild kiwifruit): 130782773
Entry
130782773         CDS       T09464                                 
Name
(RefSeq) WD repeat-containing protein VIP3
  KO
K12602  WD repeat-containing protein 61
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130782773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130782773
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     130782773
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Vps41 NBCH_WD40 Beta-prop_WDR35_TULP_N eIF2A WD40_RFWD3 Ge1_WD40 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_DCAF12 Cytochrom_D1 Beta-prop_IFT140_1st Nbas_N PROPPIN CFAP43_N Beta-prop_WDR11_1st PD40 DUF5711
Other DBs
NCBI-GeneID: 130782773
NCBI-ProteinID: XP_057498161
LinkDB
Position
1:complement(18344294..18349163)
AA seq 321 aa
MRLAGLKSVDNAHDDSVWAATWVPATADRAALLLTGSLDETVRLWGSDELSCVSTNAGHC
LGVVSVAAHPSGVIAASASLDSFVRVFDVDHNNTIATLEAPPSEVWQMQFDPKGTTLAVA
GGGSASVKLWDTAEWKLIASLSIPRPEGPKPSDKNANKKFVLSVAWSPDGKRLACGSMDG
TISIFDVPRAKFLYHLEGHFMPIRSLVYSPVDPRVLFSASDDGHVHMYDAEGKSLINALS
GHTSWVLSVDASPDGAAIATGSSDRTVKLWDLKMRAAMQTLSNHADQVWAVAFRPPGGPG
IQAGRLASVSDDKSISLYDYS
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaggctcgcgggcctgaaatcggtggacaacgcccacgacgactcggtgtgggcagcg
acatgggtcccggccaccgcggaccgggcagcgctgctcctgactgggtcgctcgacgag
acggtgaggctgtggggctccgacgagctctcttgcgtctccactaacgccggccactgc
ctcggcgtcgtctccgtcgccgcccacccatctggcgtcatcgccgcctccgcctccctc
gacagcttcgtcagagtcttcgatgtcgaccacaataacaccatcgcaactctcgaggcc
ccgccctcggaagtctggcaaatgcaattcgaccccaagggaaccactctagcagttgct
ggtgggggcagcgcatccgtcaaactgtgggacactgcggaatggaaactgattgcctcc
ttatccatccctcgccctgaaggaccaaaaccctccgataaaaatgccaacaagaagttt
gttctctcagttgcatggagccccgacgggaaacgattggcttgtggctcaatggacggc
accatctccatttttgacgtgcctcgtgccaaattcctgtaccatttggaaggccacttc
atgcccatccgttctctcgtgtattcccctgttgatccgagggtactcttctcggcttcg
gatgacgggcacgtccacatgtacgatgctgagggaaagagcttgatcaatgccttgtcg
gggcacaccagttgggttttgagtgtggatgcgagtcctgatggggcggccattgccacg
ggatcaagtgaccgaacggtgaagctgtgggacctcaaaatgagggcggcgatgcagacg
ctaagcaaccatgcggaccaggtttgggctgtggcgtttagaccgcctggcggacctggc
attcaagctggaagactcgctagtgtgtcggatgacaagagcatatcactgtatgattac
tcctga

DBGET integrated database retrieval system