Actinidia eriantha (wild kiwifruit): 130782797
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Entry
130782797 CDS
T09464
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130782797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130782797
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
130782797
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
130782797
NCBI-ProteinID:
XP_057498207
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Position
1:18360775..18364621
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AA seq
218 aa
AA seq
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MGDETALTVDGDISSSNSRSHVLNLDIYPLNCYYFGSKQALSLNDETIADRVDRMKSNYA
AHGLRTCVEAVILVELFKHPHVLLLQIRNCVFKLPGGRLRPGESETDGLKRKLARKLSVG
EEGSGLDWEVGECLGMWWRPDFETLLYPYLPPNVKKPKECIKLFLVKLPASRRFTVPRNF
KLLAVPLCQIHEDHKTYGPIISGVPQLLSKFSFNIIEP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgaaacggctttgacggtggatggcgatatcagtagcagcaacagtcgcagt
cacgtgttgaacttggacatttacccactcaattgctactatttcggctccaaacaagcc
ctctctctcaacgacgagaccatcgccgatcgcgtcgatcgtatgaaatccaactacgct
gctcacggattgaggacttgtgtggaggcagttattctggttgaattgttcaaacatccc
catgtattactcttacaaatacgcaattgtgtatttaagctaccgggcggtcgcttgaga
ccaggtgaatcagagactgatggtctgaagcgtaagcttgcgaggaagctatccgttggt
gaagaaggcagtgggttagactgggaggtgggagaatgccttgggatgtggtggaggccc
gactttgaaaccttgttgtatccatatttgccaccaaacgtgaaaaagcctaaggagtgc
ataaaactctttctcgtgaagctaccagcgagtcggagatttactgtaccaagaaatttc
aaattgcttgccgttccattgtgccaaatccatgaagaccacaagacatatgggccgatt
atatcaggagttcctcaactgctttcgaaattctccttcaacatcattgaaccctaa
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