Actinidia eriantha (wild kiwifruit): 130783025
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Entry
130783025 CDS
T09464
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130783025
09123 Folding, sorting and degradation
03018 RNA degradation
130783025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130783025
03041 Spliceosome [BR:
aew03041
]
130783025
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130783025
mRNA degradation factors
5'-3' decay
Lsm complex
130783025
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130783025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
130783025
NCBI-ProteinID:
XP_057498512
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Position
8:complement(20868559..20875988)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFNQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaagagacagtcttggatttggccaagtttgttgacaagggtgttcaa
gtcaagcttacgggtggaagacaagtgacagggactctgaaaggatatgatcaattattg
aacctcgtgttggatgaagccgtagagttcctaagagatccagatgatccactgaagact
actgatcagaccaggcgtcttggcttaatcgtttgtaggggaactgctgtaatgcttgta
tcaccaactgatggaactgatgagattgctaatccttttaaccagccagacggggcctaa
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