Actinidia eriantha (wild kiwifruit): 130783638
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Entry
130783638 CDS
T09464
Name
(RefSeq) pre-mRNA-processing factor 19 homolog 1-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
aew04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130783638
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130783638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130783638
04121 Ubiquitin system [BR:
aew04121
]
130783638
03400 DNA repair and recombination proteins [BR:
aew03400
]
130783638
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130783638
Spliceosome [BR:
aew03041
]
Complex B
Other components
Prp19 complex
130783638
Complex C
Prp19-CDC5 complex
130783638
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
U-box type E3
130783638
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
130783638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_Aladin
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_WDR41
B-prop_COPA_B_2nd
zf-Nse
Beta-prop_DCAF4
Beta-prop_ACSF4
U-box
KNTC1_N
PAS_11
PUMA_CC
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
130783638
NCBI-ProteinID:
XP_057499358
LinkDB
All DBs
Position
8:complement(5075135..5096362)
Genome browser
AA seq
525 aa
AA seq
DB search
MNCSISGEVPEEPVVSKKTGLLFEKRLIERHISDYGKCPITGEPLSMEEIVPIKTDKIVK
PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAQTERQIPMSALAAPEVNASALSIGKRGAADEGMGPDAKKIRRGISASIIS
ELTDCNAALSQQRKKRQIPPTLAPVDAVERYTQLFSYPLHKTSKPGILAMDILYSKDIIA
TGGIDTNAVIFDRPSGEILSTLGGHSKKVTSVKFVSQGDFVVTGSADKTVRIWKDSENGN
YDCQNTLKDHTAEVQAVTIHATNNYFVTASLDNTWCFYDLSSGSCIAQVEDSSGSGGYSS
AAFHPDGLILGTGTTEAIVKIWDVKSQANVARFDGHVGAVNAVSFSENGYFLATAAHDGV
KLWDLRKLRNFRTFAPYGENTPTQSVEFDHSGSYLGIAGSDIRVYQVANVKSEWNCIKTF
PDLSGTGKAMCVKFGPDAKYLAVGSMDRNLRVFGLPGDGDDPEES
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaactgttcaatttccggcgaagttccggaggaaccagtggtttcgaagaagaccgga
cttctcttcgagaagcgattgattgagagacatatatctgattatggaaaatgccctatt
actggggagcctctgtctatggaggagattgtccccatcaaaaccgacaagattgtaaag
ccaagaccagtacaagctgcaagcataccggggatgcttgggatgttccagatagaatgg
gatggccttatgctatccaatttcgccttggagcaacaattgcatacggcaaggcaagag
ctaagtcatgctttataccagcatgatgctgcttgtcgtgtaattgcaagactgaagaaa
gaaagggatgaagcaaggtcattacttgcgcaaacggaaagacagataccaatgtcggca
ctagcagcgcctgaagttaatgcttctgctttgagcattgggaaaagaggtgctgcagat
gagggtatgggaccagatgcaaagaaaatccggcgaggaatttctgctagcattatttca
gagcttactgactgtaatgcggcactttcacagcagcgcaaaaagcgtcagatccctcca
acgttggctcctgttgatgcagtggagaggtatacgcaactcttcagttatcctcttcat
aaaaccagcaaacctggcatcttagcgatggatatcctttactcgaaggatattatagca
acaggtgggattgatacaaatgctgtaatttttgatcgaccatcaggagagatcttgtct
acactcggtggtcattcaaagaaggttaccagtgttaaatttgtatctcagggtgatttt
gttgttaccggttcagcagacaaaacggttcgcatatggaaagattctgaaaatgggaac
tatgattgtcagaatacattgaaggatcatactgctgaggttcaagcagtcactattcat
gccaccaacaattactttgtgacggcttctctcgacaatacatggtgcttttatgatctc
tcttctggttcatgcatcgcacaggttgaagattcttcaggatccgggggttattcatct
gctgcttttcatcctgatggtctcatcctgggaacaggcaccacagaggcaattgtcaaa
atttgggatgtaaaaagtcaggcaaatgttgcaagatttgatgggcatgttggggcagta
aatgctgtatctttctcagaaaatggttatttcctagcgactgcagcacatgatggagtt
aagctctgggatttgcgcaaattgaggaactttcgaacatttgcaccatatggtgaaaat
acaccaacacaatcggtggagtttgaccatagtggaagctaccttggtattgccggctca
gatataagggtttaccaagttgcaaatgtcaagtctgaatggaattgtatcaaaaccttc
cctgatttgtcaggcacaggtaaagctatgtgtgtgaaatttggtccggacgccaaatac
ctagcagtagggtcaatggaccgaaacctccgtgtatttggccttccaggggatggtgat
gatccagaagaatcttaa
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integrated database retrieval system
