Actinidia eriantha (wild kiwifruit): 130783795
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Entry
130783795 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130783795
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130783795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130783795
03041 Spliceosome [BR:
aew03041
]
130783795
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130783795
Spliceosome [BR:
aew03041
]
Complex B
Other components
Prp19-related factors
130783795
Complex C
130783795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
ARM_TT21_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
130783795
NCBI-ProteinID:
XP_057499533
LinkDB
All DBs
Position
8:complement(25132811..25139566)
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AA seq
917 aa
AA seq
DB search
MAIPQELYPSQDDLLYEEELLRNPFSLKLWWRYLVARTESPFRKRAVIYERALKALPGSY
KLWYAYLRERLELVRNLPITHSHYQTLNNTFERALVTMHKMPRIWIMYLLILTEQKLLTR
TRHTFDRALCALPVTQHDRIWEPYLVFVSQKGVPIETSLRVYRRYLKYDPSHIEDFIEFL
VNSSLWQEAAERLAGVLNDDQFYSIKGKTKHRLWLELCDLLTKHAKEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLADYYIRRDLVEKARDVFDEGMTTVVTVRDFSVIFDAYSQFEESML
AFKMDGESEDEGDDGEENGEEDDDDDRLDVGKLEKKLKGFWLSDDKDVDLRLARLEHLMD
RRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWV
AFAKLYENHKDVANARVIFDKSVQVNYKTVDNLASVWCEWAEMELRHKNFNGALELMRRA
TAEPSVQVKQRVAADGNEPVQMKLHKSLRLWAFYVDLEESLGTLESTRAVYERILDLRIA
TPQIIINYAMLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERA
RELFEHAVEVAPAESAKPLYLQYAKLEEDYGLAKRAMKVYDQATKALPPNEKLSMYEIYI
ARAAEIFGVPKTREIYEQAIESGLPDKDVKTMCMKYAELEKSLGEIDRARGVFVYASQFA
DPRSDPDIWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDKQPNLD
ETMDALKKAGVTEDEMAALEKHLVPVANNTSTKDSDRKVGFVSAGVESQTDGGIKTTANH
EDIELPEESDSEDDERVEIAQKDVPSAVFGGLIRKREEVDSDANGVDTATAAAAAKDKDS
DAHLGALERIKRQRRGL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccacaggagctctatccgagccaagacgacctcctctacgaagaagaactc
ctccgcaaccccttcagcctcaagctatggtggcgctacctggtggctcgtacagaatcc
cccttcaggaagcgcgccgtcatctacgagcgagccctcaaggccctccccggaagctat
aagctctggtacgcctacctccgcgagcgcctcgagctcgtccgcaacctccccatcaca
cactcacactaccaaaccctaaacaacaccttcgaacgagccctcgtcaccatgcacaaa
atgcccagaatttggatcatgtacttgctgattttgacggagcagaagctcctcactcgc
acacgacacaccttcgatcgcgctctttgcgcgctcccggtcacgcagcatgatcggatt
tgggagccctacttggtgttcgtcagccaaaagggtgttccgatcgagacctcgcttagg
gtttatagacggtacttgaagtatgacccgtctcatatagaggattttattgagtttttg
gtgaattcgagtctctggcaagaggctgcggagaggttagctggggttttgaatgatgat
cagttttattcgattaaggggaagacgaagcataggttgtggcttgaactgtgtgatttg
ctgactaagcacgcgaaggaggtttcggggttgaatgtggatgcgataattaggggaggg
attcggaagttcacggatgaggtcgggcggctttggacttcactggctgattattatatc
aggagggatttggtggagaaggcaagggatgtgtttgatgaggggatgactactgttgtg
acggtgagggattttagtgtgatctttgatgcatattcacaatttgaagagagtatgctt
gctttcaagatggatggagagagtgaggatgagggagatgatggcgaagaaaatggtgaa
gaggatgacgatgatgaccgtttggatgtggggaagcttgagaagaagcttaaagggttt
tggttgtctgatgataaagacgttgatttgaggttggcacggttggagcatctcatggat
agaaggccggaactggctaacagcgtgcttcttcgccaaaatccacataatgtggagcag
tggcaccgtcgggtaaaactttttgagggtaaccccacaaagcaaattctgacttacaca
gaggcagtgagaacggttgatcccatgaaagctgtggggaaacctcatacattatgggtt
gcttttgccaagttgtatgagaaccacaaggatgttgccaatgcaagagtaattttcgat
aagtcagtgcaggtgaactacaaaactgttgataatttggctagtgtttggtgtgaatgg
gctgaaatggaacttcgacacaagaattttaatggcgctcttgagttgatgaggcgtgcg
acagcagaaccatcggtgcaagtgaaacagagagtggctgctgatggcaatgaaccggtg
cagatgaaactgcacaaatccttgaggctttgggcattctatgtggatttagaggaaagc
ctgggtaccttagagtcgacacgtgcagtttatgaacggatattggatcttagaatagcc
acaccacaaatcataattaactatgctatgcttttggaggaacacaaatactttgaggat
gccttcaaggtatatgaaagaggcgtcaagatttttaaatatccgcatgtaaaggacata
tgggtcacatatctttccaaatttgttaaaagatacgggaaatcaaaactggaacgtgcg
agagagttgtttgagcacgctgttgaagtggcacctgctgaatctgcaaagccattgtac
ctacaatatgctaaattagaggaggattatggtcttgcaaagcgagcgatgaaggtttac
gatcaagctacaaaggcacttccacccaatgaaaagttgagtatgtatgagatatacata
gctcgtgctgctgagatatttggggttccgaaaacaagggaaatatatgagcaagcgata
gaatctggtcttccagacaaagatgtgaagaccatgtgcatgaaatatgcagagctagag
aagagtcttggagaaatagatcgtgctcgtggagtttttgtatatgcatctcaatttgct
gatccacgatcggatcctgatatctggaacaaatggcacgagtttgaggtgcagcatggc
aatgaagacaccttccgggaaatgctacgaatcaaacgtagtgtctctgcaagctatagc
cagacacatttcatccttcctgaatatttgatgcaaaaggacaagcagccaaatcttgac
gaaacaatggatgcattgaaaaaagctggtgttactgaagacgaaatggctgctctggag
aagcatttagtgcctgtagccaataacacgtccaccaaagacagtgacaggaaagtgggc
tttgtgagtgccggagtggagtctcagaccgatggagggataaaaaccaccgcaaatcac
gaggatatcgagctgccggaggagagtgactcagaagacgatgaaagagttgagattgcc
caaaaagatgttccctccgccgtctttggtggtttgattcggaagcgggaagaggttgat
agtgatgccaacggagtcgacactgccaccgccgccgctgctgctaaagataaagatagt
gatgcccatctcggtgcgctggagagaataaaaaggcaaaggcgaggactatag
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