Actinidia eriantha (wild kiwifruit): 130783979
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Entry
130783979 CDS
T09464
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04120
Ubiquitin mediated proteolysis
aew04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130783979
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
130783979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130783979
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130783979
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130783979
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130783979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
zf-C3HC4_2
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
zf-C3HC4
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_RFWD3
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
WD40_like
Beta-prop_WDR75_1st
Beta-prop_DCAF12
zf-C3HC4_4
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
zf-RING_5
U-box
Beta-prop_IFT122_2nd
RING_XB3-XBAT31
Baculo_p24
zf-RING_10
DUF4349
DUF1664
zf-Nse
zf-RING_6
Prok-RING_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
130783979
NCBI-ProteinID:
XP_057499784
LinkDB
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Position
8:complement(26446660..26458791)
Genome browser
AA seq
689 aa
AA seq
DB search
MGDSSMGALVPSVKSEPEPSDAAGEVSAPATEPPPQIPAPPPEKADAVETAAAELDKDFL
CPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCGHYLTANHLFPNFLLNKLLKKT
SARQIAKHGTPFEQLRQALQQGCEMPVKELDGLLALLMEKKRKMEQEEAEMNMQILQDFL
HCLRKQKLDELNQIQTDLQYIKEDINSVERRRMELYRAKERYTVKLRMIVDDPSAANGWP
SLIDRRSGGMTSSLQNIQAHCRMNTGNSQSRKADAKALVNSQMVQRKDSHGGSDSQHVTQ
SGLALARKKRVLAQQFNDLQECYLQKRRHGARQSYKQEERDINVMNREGYHAGLEDFQSV
LSTFTRYSRLRVISELRHGDLFHSANIVSSIEFDRDDQLFATAGVSRRIKVFEFSSVVNE
QADVQFPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVTTRQSVMEYEEHEKRA
WSVDFSRTEPSMLVSGSDDCKVKIWCTRQEASVLNIDMKANICSVKYNPGSSMHVAVGSA
DHHIHYYDLRNVSQPLHVFSGHRKAVSYVKFLSSNELASASTDSTLRLWDVKENVPLRTF
RGHTNEKNFVGLTVNSEYIACGSETNEVFVYHKAISKPAAWHRFASSDLNNAEEDAGSYF
ISAVCWKSDSPTMLTANSQGTIKVLVLAA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagctcaatgggggcgctggtgccctccgtgaaatcggaaccggagccgtcg
gacgcagcgggcgaagtatcggctccggcgacggaaccgccgcctcagatccccgcgcct
ccgccggagaaggcggatgcggtggagacggcggcggctgagctggataaggacttcctg
tgtccgatttgcatgcagatcatcaaggacgcgtttttgacgtcgtgtgggcacagcttc
tgttacatgtgcattgtgactcatcttcagaacaaaagcgattgcccttgttgtggtcat
tatctcaccgctaatcacctcttccccaattttcttctcaacaagttattgaagaagact
tctgctcgtcaaatagcaaaacatggaactccttttgaacagcttcgtcaggcattgcaa
cagggttgtgagatgccagttaaggagctagatggcctcttggctttgcttatggagaag
aagagaaaaatggagcaagaagaagctgagatgaacatgcaaattctccaagattttttg
cattgcctaaggaagcaaaaacttgatgagctcaatcagatacaaaccgatctccaatac
attaaggaggacataaattctgtagagagacgtagaatggagttatatagggcaaaagag
agatatacggtgaaattgaggatgattgtggatgatccttctgcggcaaatggatggcct
tcattgattgatagacgtagtggtggcatgacttctagtctccaaaacatacaggcccac
tgccggatgaacacaggcaattcacagagcaggaaagctgatgcaaaggctctagtaaac
tctcaaatggttcaaaggaaggattctcatggcgggtctgattcacaacatgttactcaa
tcaggacttgcactagctagaaaaaagagagtcctcgcacagcagttcaatgacctacaa
gagtgttacttgcaaaagcgacggcatggggctagacagtcatataaacaggaagaaagg
gacataaatgtcatgaatagagaaggttatcatgcaggacttgaggatttccagtctgtg
ctttctacctttacacgatacagccgattgagagtcatttctgagcttaggcatggagat
ctttttcactcggccaatattgtatcaagcatagaatttgatcgagatgatcaattgttt
gctactgcgggagtttcaaggcgcatcaaggtttttgaattctcttcggttgtgaatgag
caagctgatgtgcaatttcctgttgtggaaatgtccacacggtccaaacttagttgcttg
agctggaataagtacacaaaaaaccacatagccagtagtgattatgaggggatagtaact
gtttgggatgtaacaactcgtcagagtgtgatggagtatgaggaacatgaaaaacgcgca
tggagtgtagatttttcacgcactgaaccgtcaatgcttgtatctgggagtgacgactgc
aaggtcaaaatttggtgcacaagacaggaggcaagtgttcttaacatcgacatgaaggca
aatatatgttctgtcaagtacaatccaggatctagcatgcatgtagccgtaggttctgca
gatcatcacattcattactacgacttgagaaatgtcagccaaccgctgcatgttttcagt
ggacataggaaagctgtttcatacgtaaaatttttgtccagcaacgaacttgcttctgca
tccactgacagcacattgcgcttatgggatgtcaaagagaatgttccactgcgcacattc
agaggccacacaaatgagaagaattttgtcggtctcacagtaaacagtgaatacatagct
tgtggcagcgaaacaaacgaagtttttgtctaccacaaggccatttctaaacctgcagct
tggcatcggtttgcatcttcggatttgaacaatgccgaggaagatgctggatcatatttc
attagtgctgtatgttggaaaagtgatagccccacaatgctaactgcaaatagccaaggg
acgattaaagtgcttgtacttgctgcttga
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