Actinidia eriantha (wild kiwifruit): 130784222
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Entry
130784222 CDS
T09464
Name
(RefSeq) THO complex subunit 6-like isoform X1
KO
K13175
THO complex subunit 6
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130784222
09122 Translation
03013 Nucleocytoplasmic transport
130784222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130784222
03041 Spliceosome [BR:
aew03041
]
130784222
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130784222
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130784222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR41
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_EIPR1
DSE1_N
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
PRIMA1
Motif
Other DBs
NCBI-GeneID:
130784222
NCBI-ProteinID:
XP_057500017
LinkDB
All DBs
Position
9
Genome browser
AA seq
377 aa
AA seq
DB search
MGLAVDCRKWDEAAYRSSIVEERESQCRTVFRTAFPPSPHPNPNPDLIVAASSDGSVNSY
SLSSLLFSLPVGFGYDRGQNLLNARPQCFLQGHDGPAYDVKFCGNGEDALLLSCGDDGRI
RGWRWKEVSNLEGNIPLQGGHLKPILDLVNPQHKGPWGSASPIPENNAIAVDNKGESVFA
AAGDSCAYCWDVEKSEIKMVFKGHSDYLHCIVARNSGNQIITGSDDGTARIWDCRSGKCI
QVIDPEKDKKLKEFFPHVSCIALDASESWLACGNGRTLSVWNLPARECISRISTRASVQD
IVFDGNQILAVGAEPLLSRYDMNGVILSQIQCAPQSVFSISLHPASVCSTLTFCFYLLFF
DCYSSLLSFRFFFLVFF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggggttagcggtagactgcaggaagtgggacgaagcagcctacagaagcagcatagtg
gaagagagagaaagccaatgccgaaccgtcttccgaaccgccttcccaccctctccccac
cctaaccccaaccctgacctcatcgtcgccgcctccagcgacggctccgtcaactcttac
tctctctcctctctcctcttctccctcccagtgggttttggctatgacaggggccagaat
ttgttgaatgctagacctcaatgttttcttcaagggcatgatgggccggcttacgatgtc
aaattttgtgggaacggagaagatgctttgctgttgagttgtggcgatgatggccggatt
cgagggtggaggtggaaggaagtttcaaacttagaggggaatattcctttgcaaggtggt
catttgaagccaatacttgacttggtgaaccctcaacataagggtccatggggttctgct
tctccaattccggaaaataatgccattgctgttgacaataagggggaatcagtttttgcg
gcagctggtgattcttgtgcgtattgctgggatgtggagaaaagtgaaatcaaaatggtt
ttcaagggacactcagactatttgcattgtattgttgcccgtaattctggcaatcagatt
ataactggatcagatgatggaacagcacgaatatgggattgcagaagtggaaagtgtatt
caagtaattgaccccgagaaggataagaagctgaaagagttctttccacatgtcagttgc
attgctcttgatgcaagcgagagctggttggcttgtggcaatggccggactttgtctgtg
tggaatcttcctgctcgtgagtgcatttcgaggatatccactcgtgcttctgtccaagat
atagtatttgacggtaatcaaatattagctgttggagcagaaccattactcagtcgatat
gacatgaatggggttattctttcacagatacaatgcgcacctcagtccgtattttccatt
tcccttcatccagcgagtgtatgttctactttgaccttttgtttttaccttttattcttt
gattgctattcttctcttttaagttttcgcttttttttcctagtctttttttag
DBGET
integrated database retrieval system
