KEGG   Actinidia eriantha (wild kiwifruit): 130784222
Entry
130784222         CDS       T09464                                 
Name
(RefSeq) THO complex subunit 6-like isoform X1
  KO
K13175  THO complex subunit 6
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130784222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130784222
   03041 Spliceosome [BR:aew03041]
    130784222
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     130784222
Spliceosome [BR:aew03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130784222
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Mala_s_1-like PRIMA1
Other DBs
NCBI-GeneID: 130784222
NCBI-ProteinID: XP_057500017
LinkDB
Position
9:complement(993751..1004681)
AA seq 377 aa
MGLAVDCRKWDEAAYRSSIVEERESQCRTVFRTAFPPSPHPNPNPDLIVAASSDGSVNSY
SLSSLLFSLPVGFGYDRGQNLLNARPQCFLQGHDGPAYDVKFCGNGEDALLLSCGDDGRI
RGWRWKEVSNLEGNIPLQGGHLKPILDLVNPQHKGPWGSASPIPENNAIAVDNKGESVFA
AAGDSCAYCWDVEKSEIKMVFKGHSDYLHCIVARNSGNQIITGSDDGTARIWDCRSGKCI
QVIDPEKDKKLKEFFPHVSCIALDASESWLACGNGRTLSVWNLPARECISRISTRASVQD
IVFDGNQILAVGAEPLLSRYDMNGVILSQIQCAPQSVFSISLHPASVCSTLTFCFYLLFF
DCYSSLLSFRFFFLVFF
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggggttagcggtagactgcaggaagtgggacgaagcagcctacagaagcagcatagtg
gaagagagagaaagccaatgccgaaccgtcttccgaaccgccttcccaccctctccccac
cctaaccccaaccctgacctcatcgtcgccgcctccagcgacggctccgtcaactcttac
tctctctcctctctcctcttctccctcccagtgggttttggctatgacaggggccagaat
ttgttgaatgctagacctcaatgttttcttcaagggcatgatgggccggcttacgatgtc
aaattttgtgggaacggagaagatgctttgctgttgagttgtggcgatgatggccggatt
cgagggtggaggtggaaggaagtttcaaacttagaggggaatattcctttgcaaggtggt
catttgaagccaatacttgacttggtgaaccctcaacataagggtccatggggttctgct
tctccaattccggaaaataatgccattgctgttgacaataagggggaatcagtttttgcg
gcagctggtgattcttgtgcgtattgctgggatgtggagaaaagtgaaatcaaaatggtt
ttcaagggacactcagactatttgcattgtattgttgcccgtaattctggcaatcagatt
ataactggatcagatgatggaacagcacgaatatgggattgcagaagtggaaagtgtatt
caagtaattgaccccgagaaggataagaagctgaaagagttctttccacatgtcagttgc
attgctcttgatgcaagcgagagctggttggcttgtggcaatggccggactttgtctgtg
tggaatcttcctgctcgtgagtgcatttcgaggatatccactcgtgcttctgtccaagat
atagtatttgacggtaatcaaatattagctgttggagcagaaccattactcagtcgatat
gacatgaatggggttattctttcacagatacaatgcgcacctcagtccgtattttccatt
tcccttcatccagcgagtgtatgttctactttgaccttttgtttttaccttttattcttt
gattgctattcttctcttttaagttttcgcttttttttcctagtctttttttag

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