Actinidia eriantha (wild kiwifruit): 130784633
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Entry
130784633 CDS
T09464
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130784633
09123 Folding, sorting and degradation
03018 RNA degradation
130784633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130784633
03041 Spliceosome [BR:
aew03041
]
130784633
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130784633
mRNA degradation factors
5'-3' decay
Lsm complex
130784633
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130784633
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
130784633
NCBI-ProteinID:
XP_057500555
LinkDB
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Position
9
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AA seq
98 aa
AA seq
DB search
MSSGTGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISIVGELDEELDASLDLSELRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgggactgggcttgaatcccttgtagatcaaacgatttctgtcattacaaat
gatggacggaatatagtgggagttttaaaaggctttgaccaggctacgaatataattctt
gatgaatctcatgaacgtgtttactccactaaggaaggtgtccagcaacttgtgttaggc
ctatacatcataagaggcgacaacataagcatcgtgggcgagcttgacgaagaactggat
gccagcttggacctgtcagaactgagagctcatcctttgaagcctgttatccattga
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integrated database retrieval system