KEGG   Actinidia eriantha (wild kiwifruit): 130784743
Entry
130784743         CDS       T09464                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03018  RNA degradation
aew03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130784743
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130784743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130784743
   03041 Spliceosome [BR:aew03041]
    130784743
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130784743
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     130784743
Spliceosome [BR:aew03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    130784743
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 130784743
NCBI-ProteinID: XP_057500704
LinkDB
Position
1:20724101..20728465
AA seq 98 aa
MSSGTGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISIVGELDEELDASLDLSELRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcaagtgggactgggcttgaatcccttgtagatcaaacaatttctgtcattacaaat
gatggacggaatatagtgggagttttaaaaggctttgaccaggctacgaatataattctt
gatgaatctcatgaacgtgtttactctaccaaggaaggtgtccagcaacttgtgttaggt
ctatacatcataagaggcgacaacataagcatcgtgggggaacttgatgaagaactggat
gccagcttggacttgtcggaactgagagctcatcctttgaagcctgttatccattga

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