Actinidia eriantha (wild kiwifruit): 130784743
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Entry
130784743 CDS
T09464
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130784743
09123 Folding, sorting and degradation
03018 RNA degradation
130784743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130784743
03041 Spliceosome [BR:
aew03041
]
130784743
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130784743
mRNA degradation factors
5'-3' decay
Lsm complex
130784743
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130784743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
130784743
NCBI-ProteinID:
XP_057500704
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Position
1:20724101..20728465
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AA seq
98 aa
AA seq
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MSSGTGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISIVGELDEELDASLDLSELRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgggactgggcttgaatcccttgtagatcaaacaatttctgtcattacaaat
gatggacggaatatagtgggagttttaaaaggctttgaccaggctacgaatataattctt
gatgaatctcatgaacgtgtttactctaccaaggaaggtgtccagcaacttgtgttaggt
ctatacatcataagaggcgacaacataagcatcgtgggggaacttgatgaagaactggat
gccagcttggacttgtcggaactgagagctcatcctttgaagcctgttatccattga
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