Actinidia eriantha (wild kiwifruit): 130785057
Help
Entry
130785057 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130785057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130785057
03036 Chromosome and associated proteins [BR:
aew03036
]
130785057
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130785057
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130785057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
TPR_NUP120_160
NUP160_helical
ANAPC3
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
130785057
NCBI-ProteinID:
XP_057501070
LinkDB
All DBs
Position
9:complement(15439122..15480749)
Genome browser
AA seq
1511 aa
AA seq
DB search
MGGRSLESMEVPIVGSDSVKWIELSLPSPSPSSTAPVNGTLSLPPPPSYAPPTEDAASCS
VIGDPPNYLIWRINKDHAHALEIQELCAYKEFPNIGLRIIFPDALWPFALICKDETSCAS
GSPYLLYALTISGVAYLFRLKSIYNYASSSVFPPNQITEFNIQTYPHYGAITAVAAAAGC
LVIGKDDGSVSCFQLGTLEPCAPGFVHELRDDAGFGRLWGLMSRRSISAVHDLVLSELHG
KKLLFVLHSDGTLRVWDFMSRSRIFINTTSIPTLAGATFVSLWVGEADNDKSVIPLAILY
KRSLEVSTESICVYNLRYSLGDRIILLLDSSVQNIPLEEGSIIDVKLTSNKIWILKEDGL
FTLSLFNAPDNGGGARCYSLQEAFLADQLFQSSEHSSNDLLWLAQSIFSSVKDQIVPLVS
SIFLRRILLPGVYHSNVLRATFQDYNKHLSDSEFYSLTVDGLKKEILSLVEHEGVSESPV
SVLHCWKTFSTRYXHSWCKVNSPFGLLFDSSTGTVGLIRKNSISLFRCLEEIELLIYGSF
DEIGDILCSGLDFSDDNLDREILFEVLRCVINVSQQLGKASSAIFYESLLSAPSISSEEV
LPRLLKILETGYSSSVTSLHIFELGADIAWEKEVADHKNLRKFSIEMFLSLQALSNKAIT
WGKVLDVIESYLKFLVPRKIIQKFDSEVGFNICTSAVVQATSQVAKLMFESALDMLLLLC
YLVNMSGQIHMLHDDISRIQLEMVPMIQEIITEWHIIHFLGTTTSESSAAEDFSSQLSSL
QIDNNADKRTWTEKLGKCDFTLACVLLLNIQSSSKDRSHLFVKCLPDPASLINSSREFTS
WIMWGSTGEETPSFFSHSTELALILLKHGQYDAVEYLLSIVDEHSRKERISETIQSDGGE
WGIXSHLLGCSLLAQAQRGLQGLLKEKKVSEAVRCFFRASAVQGAPQALQSLSYKAGLPH
LGFTGYLSAAAWKLHYYQWAMHIFEQYNLSEGACQFALAALEQVDEALGPGDNTTKGDTL
NESATTIKGRLWANVFKFTLDLKKYNDAYCAIISNPDEESKYICLRRFIIVLYEHGSFKI
LCDGQIPFIGLAEKVERELVWKAGRSDVLAKPNAFKLLYAFEMQRHDWRRAATYIYLYSV
QLRTGAALKNHQHRSLILQERLNGLSAAINALHLVHPAYAWIDPLLEESSVPREHYPSKK
ARLAVHEQSAGNDIQAQRLQSYVNIEKLENEFVLVSAEYLLSLANINWTFTGNETPPPDM
VDVLVQAELYDMAFTVILKFWKGPFLFRELERVFTEMSMKCCPNRVGPTLIGNNRPHGLL
LTSSKDEVVIHGSTDMVPPAQRSKGNTQWESLEIYLDKYKEFHPRLPIIVAETLLSADPQ
IELPLWLVQMFKGVRKQSAWGMTGDGVNVASLFRLYVDYGRYPEATNLLLEYIESFASMG
PADIIRRKRPLAVWFPYTTVERLWCRLEELIIRGHMVDQCQKLKKLLQGALLSHLNLLRG
DSEDVQSSSMC
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaggtcattggagagcatggaggtccctatcgtcggcagcgattccgtcaag
tggatcgaactctcactcccttctccttcgccatcttccaccgcccccgttaatggcact
ctttccttgccgccgccgccgtcttacgctcctccgaccgaggacgccgcttcctgctcc
gtcattggagaccctcccaactatctcatctggagaattaacaaggatcatgcacatgca
ctggagatacaggaactctgtgcttataaagaatttccaaatattggattgcgaatcatc
tttccagatgcactctggccatttgctttaatatgcaaagacgagacgagttgtgcttct
gggagtccctacttgctttacgcattgactatctcaggagttgcttacctatttagactc
aaaagcatttataattatgcatcttcctctgttttcccaccaaaccagatcacagagttc
aatattcaaacttatcctcattatggagcaataacagctgtagcagcagcagcgggatgt
cttgtaattgggaaagatgatgggtctgttagttgttttcaacttggcacgcttgagcct
tgtgctccgggttttgtgcatgaactgcgggatgatgcaggttttggtcgcttgtggggt
ttgatgtcaaggaggtcaataagtgctgtgcatgatctggttttgtcagagttgcatggg
aaaaagcttctctttgtgcttcattctgatgggaccttgcgagtttgggactttatgagt
cgtagcagaattttcattaataccacgagtattccaacattggcaggagctacatttgta
agcttatgggtaggtgaagctgacaacgataaaagtgttattcctttggcaatcctatat
aaacgttctctggaagttagcacggagagcatatgtgtttataaccttcgttatagcctg
ggggacaggatcattttattgttggattcttcagtgcaaaacatcccattggaggagggg
tcgattattgatgtcaaactcacttcaaacaaaatatggatactcaaagaagatgggtta
ttcacgctcagtttgtttaatgcacctgataacggggggggagcacgctgttattctttg
caggaagcatttcttgctgatcagctattccaaagttcagaacattcttcaaatgatctt
ctttggcttgctcaatcaatattttcatctgtgaaggatcaaattgtcccgctcgtgtct
tctattttcttacgtaggatacttcttcctggggtttatcatagtaatgttctccgagca
acatttcaagattataacaagcatttgagtgattccgagttctattccttgactgttgac
ggattgaagaaagaaatcctttcccttgttgagcatgagggtgtctctgaaagtcctgtt
tcagtgctacattgctggaagacctttagtacacgttatnttcatagttggtgcaaagtc
aattcaccatttggtttactctttgattcatctacgggtactgttggtttaattaggaaa
aattcaatctcattgttccgttgtttggaggagatagagcttctcatctatggttctttt
gatgaaattggagatattttatgctctgggttggatttttccgatgataaccttgaccgt
gagattctttttgaggtgctccgatgcgtcattaatgtcagtcaacagttgggtaaagct
tcttctgctatattttatgagtcacttcttagtgcaccgtctatatcctccgaagaagtt
cttcctcgcttactcaagattttagaaacgggatatagttcctccgtcacatctctccat
atatttgagctgggagctgatattgcttgggagaaggaagtggcagatcacaaaaatctg
aggaagttctctattgagatgtttttatcacttcaagctttgtccaataaagcaatcaca
tggggaaaagttttggatgtcatagaaagctacttaaaatttcttgtacctcgcaaaatt
atacaaaagtttgattctgaagtaggtttcaatatctgcacctctgctgtggtccaggca
acgtctcaagttgcaaagctgatgtttgaatctgcattagacatgcttctcttgctatgc
tatctggtcaacatgagtgggcagattcatatgttacatgatgatatttccagaatccaa
cttgagatggttccgatgattcaagaaattattaccgagtggcatatcatccatttcttg
gggaccacaacatctgaatcctctgcagctgaagatttcagttctcagctttcatcttta
caaattgataacaatgctgataagagaacatggactgagaagctagggaaatgtgacttc
acattggcttgtgtactattattaaacatccaaagttcctctaaagatcgaagtcacctt
tttgtaaaatgtcttcccgatcctgccagcttaattaattcatcgcgggagttcactagc
tggataatgtggggcagtactggggaagaaacaccttctttctttagccattcaactgag
cttgctttaatcttacttaaacatggccagtatgatgctgttgagtatctacttagtatt
gtcgatgagcattcacggaaggagagaatatctgaaactattcagagtgatggtggtgaa
tggggcatancttctcatcttcttggatgttccctacttgctcaagcacaacgtggatta
cagggattgctgaaagagaagaaagtttctgaagctgttcgctgtttctttagagcttct
gcggtacaaggagctcctcaggctttgcagagtttatcttacaaagcaggattgccgcat
cttggtttcactggttatctgtcagctgcagcatggaagcttcattattatcagtgggca
atgcatatatttgagcagtataatttgagtgaaggtgcctgccaatttgctcttgcagcc
cttgagcaagttgatgaagcacttggtcctggagataacaccactaagggagatactctg
aatgagtccgctactacaattaaaggacgactttgggccaatgtctttaagttcacgctg
gatcttaagaaatataatgatgcatattgtgcaataatttctaatccagatgaggaaagc
aagtatatttgtttgagacgtttcataattgttctttacgaacatggttcctttaagatt
ctctgtgatggccaaataccttttattggtttagcagagaaggtagagcgagagcttgtt
tggaaggccgggcgttcagatgttttagcaaagcctaatgcatttaaattgctttatgca
tttgagatgcaacgacatgactggcgaagggcagcaacctatatttatctatattcagtt
caattgagaactggagccgctttaaaaaatcaccaacacaggtctctgattttgcaagag
aggctgaatgggctctctgctgctatcaatgcactgcatctggttcatcctgcatatgcc
tggatcgatcctcttctggaagaaagctctgttcctagggaacattatccaagtaaaaag
gctagattagcagtgcatgaacagtcagctggtaatgatattcaggctcaaagattacaa
tcttatgtcaatatagagaagctagaaaacgagtttgtgctagtatcagctgaatatttg
ctctcattggcaaacatcaactggacatttactgggaatgaaacccccccaccagacatg
gttgacgtgttggtacaggcggaattatatgacatggcttttacagttattctgaaattt
tggaaggggccctttttgttcagggaactagaaagagtctttacagaaatgtcaatgaag
tgctgtccaaacagagtaggtccgacattgattgggaataataggccgcatggtcttctg
ttgacatcatcgaaagatgaagtggttattcatggttcaactgatatggttcctccagca
caacgatctaaagggaatacccagtgggaatcgcttgagatctatcttgataaatacaag
gaatttcaccccagattaccaataattgttgcggaaactcttctttctgccgatcctcag
atagaattacctctttggttggttcagatgttcaagggtgttcgaaagcaaagtgcttgg
ggaatgactggtgatggagtaaacgttgcatcattatttcgactatatgttgattatggt
cgatatccagaggccactaatcttttgctcgagtacattgaatcttttgcatcaatggga
ccagctgatatcattcgtcgaaaaagaccattggcagtttggttcccatatacaacagtt
gagcggttgtggtgccgacttgaagaactgatcattaggggtcacatggtcgatcaatgt
caaaagctgaaaaagttgttgcaaggggctctgctgagccatcttaatctgctaagaggg
gactcggaggatgtgcagtcttcttctatgtgttaa
DBGET
integrated database retrieval system
