KEGG   Actinidia eriantha (wild kiwifruit): 130785913
Entry
130785913         CDS       T09464                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03082  ATP-dependent chromatin remodeling
aew03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130785913
   03083 Polycomb repressive complex
    130785913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aew03036]
    130785913
Chromosome and associated proteins [BR:aew03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     130785913
  Histone modification proteins
   HAT complexes
    HATB complex
     130785913
   HDAC complexes
    Sin3A-HDAC complex
     130785913
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     130785913
    PRC2.2
     130785913
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     130785913
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    130785913
  Chromatin remodeling factors
   NuRD complex
    130785913
   NuRF complex
    130785913
   NuRF complex (fruit fly)
    130785913
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_RFWD3 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML eIF2A WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_RIG_1st ANAPC4_WD40 MIOS_WD40 WD_LRWD1 NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 130785913
NCBI-ProteinID: XP_057502100
LinkDB
Position
10:complement(1704766..1709487)
AA seq 425 aa
MGKDDDEMRGEMEERLVNEEYKIWKKNTPFLYDLVVTHALEWPSLTVEWLPDRHEPPGKD
YSVQKMVLGTHTSEDEPNYLMLAQVQLPLEDAENDARQYEDDRANLGGFGCANGKVQIIQ
QINHEGEVNRARYMPQNQFIIATKTVNAEVYVFDYSKHPSKPPLDGACSPDLRLRGHNTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIFKIHEGVVEDVAWHLRHE
YLFGSAGDDQYLHIWDLRTPSVSKPIQSVIAHQSEQVNCLAFNPFNEWVVATGSTDKTVK
LFDLRKISTALHTFDRHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA
EDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPGDD
STKGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggggaaggatgacgacgagatgaggggagagatggaggagaggctagtgaacgaagag
tacaagatctggaagaagaacacgcccttcctctacgacctcgtagtcacccacgccctc
gagtggccctccctcaccgtcgagtggctccccgaccgccacgagccgccggggaaggac
tactcagtccagaaaatggttctcggcacccacacctccgaggacgagcccaactacctc
atgctcgcacaggtgcagctcccgctcgaagacgccgagaatgacgcccgccagtacgag
gacgatcgggccaatctcggcgggtttgggtgcgccaatgggaaggttcaaataatccag
caaataaatcacgaaggagaagttaaccgggctcgttatatgccccaaaaccaatttatt
attgccactaagacggttaatgcagaagtatacgtctttgattacagcaaacacccgtcg
aagcctcctctagacggtgcatgcagtcctgatttgaggttgaggggccacaacactgaa
ggatatggcttatcatggagtcagttcaagcagggtcatttattgagtggttctgatgat
gcgcaaatatgcttgtgggacattaatgcgactcccaagaataaggctcttgatgctatg
caaatatttaagattcacgaaggtgtcgtagaagacgtggcatggcatctgaggcatgaa
tacttgtttggttctgctggggatgatcaatatctgcatatatgggatctcaggactcca
tcagtcagcaagccaattcagtctgtaattgctcatcaaagtgagcaggtaaactgctta
gcttttaatcccttcaacgaatgggttgtcgcaactgggtctacggacaagactgtgaaa
ttatttgatcttcgcaagatctccacagctctgcatacctttgatcgtcacaaggaggag
gttttccaagttgggtggaatccgaagaatgagaccatcctagcttcttgttgtcttggg
aggaggcttatggtgtgggatcttagcaggattgacgaagaacagacacctgaggacgcg
gaagatggcccacccgagttgcttttcattcatggtggtcatacaagtaaaatctcagat
ttctcgtggaacccctgcgaggattgggttgttgctagtgtagctgaagataacatactt
cagatctggcagatggcagagaacatctaccacgacgaagatgacctaccgggagatgat
tccacaaaaggttcctaa

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