Actinidia eriantha (wild kiwifruit): 130786669
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Entry
130786669 CDS
T09464
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130786669
09123 Folding, sorting and degradation
03018 RNA degradation
130786669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130786669
03041 Spliceosome [BR:
aew03041
]
130786669
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130786669
mRNA cycle factors
Stress granule specific factors
130786669
Spliceosome [BR:
aew03041
]
Complex C
Other components
Complex C specific factors
130786669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_RdRP1_2
RRM_7
RRM_Nup35
IF2_N
RBD_DGKtheta
OB_RNB
GH97_C
Motif
Other DBs
NCBI-GeneID:
130786669
NCBI-ProteinID:
XP_057502999
LinkDB
All DBs
Position
10:20493679..20501095
Genome browser
AA seq
657 aa
AA seq
DB search
MAQIQVQHQSHVVSGPNGGVAASGGSGGDGANQFVTTSLYVGDLDFNVTDSQLYDLFNQV
GQVVSVRVCRDLSTRRSLGYGYVNYSSPQDAARAIEVLNFTPLNDKVIRIMYSHRDPSVR
KSGAANIFIKNLDKAIDNKALHDTFSSFGNILSCKIATDHSGQSKGYGFVQFDNEESAQI
AIDKLNGMLINDKQVYVGQFLRKQERDTAMNKTKFNNVYVKNLSESTSEEDLNKIFGEYG
ILTSVVVMRDGDGKSKCFGFVNFENTDAAANAVEALNGKKIDDKEWYVGKAQKKSERELE
LKSRFEQSAKEVVDKFQGLNLYVKNLDDSIDDDKLRELFSEFGTITSCKVMRDPSGISRG
SGFVAFTTAEEASRALAEMNGKMVGSKPLYVALAQRKEDRRARLQVQFSQMRPVAMAPSL
PRMPMYTPGAPGLGQQLFYGQAPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPMVQQ
GQQGQRPGGRRGAGPVQQGQQPLPLMQQQMFPRGRVYRYPAGRNMQDVPMPGVAGGMLSV
PYDMGGMLSRDTAVGQPMAVPALATSLANAPPDQQRTMLGENLYPLVDQLEHEHAAKVTG
MLLEMDQTEVLHLLESPEALRAKVKEAMDVLRNVSQQHGNSPADQLASLSLNDNLVS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcaggttcagcatcagagccatgttgtttcgggaccgaacggcggtgtg
gcggcgtcgggaggcagtggcggcgatggagcgaatcagttcgtgacgacgtcgttgtac
gttggggacttggacttcaacgtgactgattcgcaactttacgatctgttcaaccaggtt
ggccaggtcgtgtcggttagggtttgcagggatttgagcactcggcgatctctcggctat
ggctatgttaactacagtagccctcaagatgcggcaagggcaattgaagtactcaacttc
actccacttaatgacaaggttatcaggataatgtattctcatcgtgaccccagtgttcgt
aagagtggtgctgcaaacatatttatcaagaatttggacaaggcaattgacaacaaagca
ctacatgatactttttctagctttggcaacattctttcttgcaagatagctactgatcat
tctggccagtctaaaggctatggttttgtacagtttgataatgaggaatctgctcaaatt
gcaattgacaagctaaatggcatgctcatcaatgataaacaagtttatgtggggcaattt
cttaggaagcaagaaagagacactgccatgaacaaaacaaaatttaacaatgtttacgtg
aagaatctctcagaatcaacatctgaagaggacctgaacaaaatatttggtgaatatgga
atacttactagtgtggtagtgatgagggatggagatggaaaatccaagtgttttggattt
gtcaactttgaaaacactgatgctgctgctaatgctgttgaggctttaaatggtaaaaaa
attgatgacaaggagtggtacgttgggaaagcccagaagaagtctgaaagagaactcgaa
ctaaaaagtcggttcgagcagagcgccaaggaagtagtagacaaattccaagggttgaat
ttgtatgttaagaatttggatgacagcattgatgatgataaacttagggaattgttctca
gaatttggtactattacttcatgcaaggttatgcgcgatcctagtggaattagcagaggc
tcaggatttgttgccttcactaccgctgaagaggcatctcgtgctcttgcagagatgaac
gggaaaatggttggaagcaaaccactctatgttgctcttgcccagcggaaagaagataga
agagcaaggttgcaggtacagttttcccaaatgcgaccagttgcaatggcaccgtcactc
cctcgtatgccgatgtataccccgggcgctccaggccttggacaacaattgttttatggg
caggcaccccctgctataattcctccccaggctggatttggttaccagcagcaacttgtt
cctggaatgaggccaggaggggctcccatgccaaatttcttcatgccaatggtccagcag
ggtcagcagggccagcgcccaggtgggcggcggggggcaggtcctgtgcaacaagggcaa
cagcctttgccattgatgcagcagcagatgtttcctaggggacgtgtttatcgttaccca
gctggtcgcaatatgcaagatgttcccatgcctggagttgccgggggcatgctttctgtt
ccctacgacatgggcggaatgctttctcgagatactgctgtggggcagcctatggcagtt
ccagctttggctacttcccttgcaaatgcaccaccggatcagcagaggacgatgctgggt
gaaaatctgtacccgctcgtggatcagctggagcacgagcatgcagccaaggtgacgggc
atgcttctggagatggaccagaccgaggttttgcatttgcttgaatcaccagaggccttg
agagcaaaagttaaggaggccatggatgttctgaggaatgtttctcagcagcatggcaat
agcccagctgaccagctggcttctttgtccctcaacgacaaccttgtttcctga
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