Actinidia eriantha (wild kiwifruit): 130786820
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Entry
130786820 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03020
RNA polymerase
aew03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130786820
09124 Replication and repair
03420 Nucleotide excision repair
130786820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130786820
03400 DNA repair and recombination proteins [BR:
aew03400
]
130786820
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
130786820
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
130786820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
130786820
NCBI-ProteinID:
XP_057503202
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All DBs
Position
10:complement(6448426..6453250)
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AA seq
319 aa
AA seq
DB search
MEGASYQRFPKVKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCINDQTLDV
TSKDLYSSDHTVVPVDFSDSGSAMDTPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPEIHINEDMMETLSLKEKSDWVESSPTKVFGIDPDTQQVIIVDPEAYTY
DDEVIKKAEAMGKPGLIEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE
DTVEADEQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgcatcgtaccagcgattcccgaaggtgaagatccgagagctgaaggacgat
tactgcaagttcgagctccgcgacaccgacgccagcatggcgaacgccctccgccgcgtg
atgatcgccgaggtcccgacgatcgccattgacctggtggagattgaggtgaactcgtcg
gtgctcaatgacgagttcatcgcccaccgcctcggcctcataccccttaccagcgagcgc
gccatgagcatgcgcttctccagagactgcgacgcctgcgacggcgacggccagtgcgag
ttctgctccgtcgagttccatttgagggccaaatgcatcaacgaccaaaccctagatgtc
accagtaaggacctttatagctccgaccacaccgttgttcctgttgatttctctgattcc
ggatctgctatggacactcccgaacaaaggggaatcataattgtgaaattacgtcgtggg
caagaattgaggctgagagccatagccagaaaaggcattggaaaagaccatgcgaaatgg
tcacctgcagcaactgttactttcatgtatgagccagagattcatatcaatgaggatatg
atggagactttgtcacttaaggagaaaagtgattgggttgagagcagtccaaccaaagtg
tttggcattgatcccgacactcagcaggttataatagttgaccccgaggcatacacatat
gatgatgaagtgatcaagaaagcagaggcaatggggaaaccaggactcattgaaatctat
gccaaagaagacagtttcatattcacggtggaatctactggcgcgatcaaagcttctcag
ctggtgcttaatgcgatagaagttcttaaacaaaagctggacgcagttcgcctatcggag
gataccgtcgaagccgatgaacagttcggcgagttgggtgcacatatgcgtggaggttga
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