Actinidia eriantha (wild kiwifruit): 130787335
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Entry
130787335 CDS
T09464
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130787335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130787335
03009 Ribosome biogenesis [BR:
aew03009
]
130787335
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130787335
Spliceosome [BR:
aew03041
]
Complex A
U1 snRNP components
U1 related factors
130787335
Complex B
130787335
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
Helicases
130787335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130787335
NCBI-ProteinID:
XP_057503711
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All DBs
Position
11:complement(15989026..15996270)
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AA seq
497 aa
AA seq
DB search
MSRYDSRSADPGSYRDRKSDSGFGGARSSSSRRDYEGAESPRKLDLDGLTPFEKNFYAES
ASVAAMSERDVEEYRRRREITVEGRDVPKPIKAFRDVGFPDYVMQEIVKAGFTEPTAIQA
QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQ
IQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRV
TYLVLDEADRMLDMGFEPQIQKIVSQIRPDRQTLYWSATWPKEVEQLARRFLYSPYKVVI
GSPDLKANHAIRQHVEIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMD
GWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLED
YVHRIGRTGRAGAKGTAYTFFTAANARFAKDLISILEEAGQKVSPELAAMGRGAPPPPGL
GGFRDRGRGYGVGRSWN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccgccgaccccggatcgtaccgcgaccgcaaaagtgat
tcggggtttggtggggctcgttcgtcgtcgagcaggagggactatgaaggggccgagtca
ccgcggaagttggatttggacgggttgactccattcgagaagaatttctatgccgagtcg
gcttcggtggcggcaatgtcggagagagacgttgaggagtaccggcggcgaagggaaatc
actgtcgaaggccgggatgtgccgaagccaatcaaggcttttcgtgatgttgggtttcca
gattacgtcatgcaagaaattgtaaaagctggctttactgaacctacagcaattcaagct
caaggatggccaatggctttaaagggccgtgatctcattggtattgctgaaacaggttca
ggcaagacacttgcctacctgttgcctgcaattgtccatgtcaatgctcaaccaatctta
gcccctggagatggtcccattgtgttagttctagctccaacccgcgaacttgctgttcag
atacagcaagaagccactaagtttggtgcatcatcaaggattaaaaatacctgcatatat
ggtggggttccgaaggggccccaagttcgtgatctccagaaaggtgttgaaattgttatt
gctactcctggaaggttgattgatatgttggaatctcatcatacgaacttgcggagggta
acgtaccttgtgttggatgaggcagatcgaatgcttgacatgggatttgaacctcagatt
caaaaaattgtttctcagattcgaccagatcgtcaaaccctatactggagtgctacttgg
ccgaaggaggttgaacaacttgcaaggcggttcctttacagcccatacaaagttgttata
ggttccccagatttgaaagccaaccatgcaattcgccagcatgtggaaattgtttccgag
aaccagaaatataacaaattggtgaagttgctggaggacatcatggatggtagccggatt
ttgatattcatggatacaaagaaaggatgtgaccagatcactcggcaacttcgcatggat
ggatggcctgctctctctattcatggagataagagtcaagcggagagggattgggtcctc
tcggagtttaaagctggcaagagtcctataatgaccgcaacagatgttgcagctcgtggt
ttagacgtgaaggatgtcaaatatgtgatcaactatgactttcctggatccctggaggat
tacgttcaccgaattggtcgaacaggaagagctggggccaaaggaaccgcatacactttt
ttcacagctgcaaatgccagatttgctaaagacctcataagcatccttgaggaagctgga
cagaaggtcagtcctgagctggcagcaatgggtcgtggggcacctcctcctccaggtctt
ggtggctttcgagatcgtgggcggggttacggtgttggtcgctcttggaactaa
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