Actinidia eriantha (wild kiwifruit): 130787618
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Entry
130787618 CDS
T09464
Name
(RefSeq) N-glycosylase/DNA lyase OGG1-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130787618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aew03400
]
130787618
Enzymes [BR:
aew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
130787618
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130787618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
130787618
NCBI-ProteinID:
XP_057503991
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Position
11:<6895983..6903891
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AA seq
394 aa
AA seq
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RDQDPSHHQSPPPATATATTTNHPPSTPPTPQTLLKTLNPNSKNPKKPRNIFTNLNPPTS
QISLPSPSLKWVPLNLPKSELFLPLTFPTGQTFRWKQTGPNQYTGVIGSHLVSLKQLQNG
DVAYFFHYTVSESSARLALLDFLNVGICLADLWEGFSTSDPRFAELAEHLGGARVLRQDP
LECLIQFLCSSNNNIVRITRMVDFVSSLGKCLGSVEGFEFHEFPSFDRLSRVSEGELREA
GFGYRAKYIVGTIDALQSKPGGGVEWLASLRKSDLQEGIDALSTLPGVGPKVAACIALFS
LDQHHAVPVDTHVWQIATRYLLPELAGARLTPKLCSRVADAFVSRYGKYAGWAQTLLFIA
ELPSQKALLPSNFVITKGQKPVKQKGGQQREQDI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
agagaccaagacccatctcaccaccaatcccctccgcccgccaccgccaccgccaccacc
acaaaccacccaccatcaacccctcccaccccacaaaccctcctcaaaaccctcaacccc
aactcaaaaaatcccaaaaaacctagaaatatcttcactaatctcaacccacccacctcc
caaatctcactcccctccccatccctcaaatgggtacccctcaatttgcccaaatcagag
ctcttcttgcccctcaccttccccacaggccaaaccttcaggtggaaacaaacagggcct
aatcagtacacaggcgttattgggtctcatttggtctccctcaaacagcttcaaaatggt
gatgttgcttatttctttcattacacagtctctgagtctagtgctaggttggccttattg
gattttctcaatgtgggtatttgtttggctgatttgtgggagggtttttcgacttctgat
ccgaggtttgctgaattggctgagcatttgggcggtgccagagtgctgaggcaagaccca
cttgagtgcctcattcagtttctttgttcatctaataataatattgttaggattacccga
atggtcgattttgtttcttcattagggaagtgtttagggtcagttgaagggtttgaattc
cacgaattcccatcattcgaccgattgtcgcgggtttcagagggagagcttagagaggcg
ggtttcggttacagggccaaatacatagttggcactatagatgctttgcaatcaaaacct
ggtggaggtgtggagtggcttgcttcgctacgtaagtccgatctgcaagagggtattgat
gctctctctactctacctggcgttggtcccaaggttgcagcatgtattgctctcttctct
ctagatcaacaccatgctgttcctgttgatacccatgtgtggcagatagcaactaggtac
cttcttcctgaacttgcaggtgcccgcctgactcctaaactttgcagtcgagtggcagat
gctttcgtgagcagatatgggaagtatgccggttgggcccaaactcttcttttcattgct
gagttaccttcacaaaaggcgctcctaccatcaaattttgtgattaccaaaggccaaaaa
cctgttaagcagaaaggcggacaacaaagggagcaggacatatag
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