KEGG   Actinidia eriantha (wild kiwifruit): 130787830
Entry
130787830         CDS       T09464                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03030  DNA replication
aew03410  Base excision repair
aew03420  Nucleotide excision repair
aew03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130787830
   03410 Base excision repair
    130787830
   03420 Nucleotide excision repair
    130787830
   03430 Mismatch repair
    130787830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aew03032]
    130787830
   03036 Chromosome and associated proteins [BR:aew03036]
    130787830
   03400 DNA repair and recombination proteins [BR:aew03400]
    130787830
DNA replication proteins [BR:aew03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130787830
  DNA Replication Termination Factors
   ELG1-RFC complex
    130787830
Chromosome and associated proteins [BR:aew03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130787830
DNA repair and recombination proteins [BR:aew03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130787830
  Check point factors
   HRAD17(Rad24)-RFC complex
    130787830
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_16 AAA_22 AAA_11 ATPase_2 AAA_assoc_2 AAA_14 DUF815 AAA_5 AAA_7 AAA_30 RuvB_N DNAX_ATPase_lid AAA_24 ResIII AAA_3 AAA_19 DUF3086 AAA_25 bpMoxR nSTAND3 SLFN-g3_helicase AAA_2 TIP49 AAA_18 ABC_tran AAA_28 TniB Mg_chelatase
Other DBs
NCBI-GeneID: 130787830
NCBI-ProteinID: XP_057504269
LinkDB
Position
11:complement(7021808..7031063)
AA seq 366 aa
MAEPISVMDIDDNNNNDDSHSLKPNNKGKNVVVAGTPPDTKATPWVEKYRPQSLTDVAAH
RDIIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGSQMHNMVLELNASDERGI
DVVRQQIQDFASTQSFSFGPKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALIC
NHVNKIIPALQSRCTRFRFAPLDAIHVSERLKHVIQAEGLDVSESGLVALVRLSNGDMRK
ALNIFQSTHMASQQITEEAVYICTGNPLPKDIEQISYWLLNETFAESFKRISAVKTRKGL
ALVDIVREVTMFVFKIKMPSDVRIQLINDLADIEYRLSFGCNDKLQLGSLIATFTRARAA
LVAAAK
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcggagccgatctctgtcatggacatcgacgacaacaacaataacgatgacagccac
tctctcaaaccgaataataagggcaaaaacgtcgtcgtcgccggcactcctccggacacc
aaagccactccatgggtcgagaagtaccgccctcagtcccttaccgacgtcgctgctcat
cgcgacatcatcgacaccattgataggcttaccagcgagaacaaattgccacatttgttg
ctttacgggcctccaggaacgggcaagacgtcaaccattctcgcggtggctcgcaagctc
tatgggtcacagatgcacaacatggttttggagttgaatgcctcagatgaacgtggaatc
gatgttgtgaggcaacagattcaggatttcgctagtactcagagcttctcatttggccca
aaatcatcagtgaagttggtcttattggatgaggccgatgccatgacaaaggatgcacaa
tttgccctacgtcgagtgattgagaagtataccaaaaacactaggtttgctcttatctgt
aatcatgtcaacaagattattccagctctgcaatcaagatgtactcgatttcggtttgct
cctcttgatgccattcatgtctctgagagactcaaacatgttattcaggctgaagggctt
gatgtatctgagagtggtttagtggcacttgtacgacttagcaatggtgacatgagaaag
gctttgaacatttttcagtcaacacacatggcttcccagcagataacagaagaagctgtc
tacatatgcactggaaatccattgccgaaagacattgagcaaatatcttactggcttctg
aatgaaacatttgcagagagttttaaacgaatatctgctgtgaagacaaggaaaggatta
gctttggtggatattgtaagagaagtaaccatgtttgtctttaagatcaagatgccatca
gatgttcgaattcagctaatcaatgacttggctgatatcgaatacaggttgagttttggg
tgcaatgataagttgcagctgggctcgctcattgctacctttacacgggctcgagctgct
ctggttgcagctgcaaagtag

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