Actinidia eriantha (wild kiwifruit): 130787830
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Entry
130787830 CDS
T09464
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03410
Base excision repair
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130787830
03410 Base excision repair
130787830
03420 Nucleotide excision repair
130787830
03430 Mismatch repair
130787830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aew03032
]
130787830
03036 Chromosome and associated proteins [BR:
aew03036
]
130787830
03400 DNA repair and recombination proteins [BR:
aew03400
]
130787830
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130787830
DNA Replication Termination Factors
ELG1-RFC complex
130787830
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130787830
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130787830
Check point factors
HRAD17(Rad24)-RFC complex
130787830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_22
AAA_11
ATPase_2
AAA_assoc_2
AAA_14
DUF815
AAA_5
AAA_7
AAA_30
RuvB_N
DNAX_ATPase_lid
AAA_24
ResIII
AAA_3
AAA_19
DUF3086
AAA_25
bpMoxR
nSTAND3
SLFN-g3_helicase
AAA_2
TIP49
AAA_18
ABC_tran
AAA_28
TniB
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
130787830
NCBI-ProteinID:
XP_057504269
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All DBs
Position
11:complement(7021808..7031063)
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AA seq
366 aa
AA seq
DB search
MAEPISVMDIDDNNNNDDSHSLKPNNKGKNVVVAGTPPDTKATPWVEKYRPQSLTDVAAH
RDIIDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGSQMHNMVLELNASDERGI
DVVRQQIQDFASTQSFSFGPKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALIC
NHVNKIIPALQSRCTRFRFAPLDAIHVSERLKHVIQAEGLDVSESGLVALVRLSNGDMRK
ALNIFQSTHMASQQITEEAVYICTGNPLPKDIEQISYWLLNETFAESFKRISAVKTRKGL
ALVDIVREVTMFVFKIKMPSDVRIQLINDLADIEYRLSFGCNDKLQLGSLIATFTRARAA
LVAAAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgatctctgtcatggacatcgacgacaacaacaataacgatgacagccac
tctctcaaaccgaataataagggcaaaaacgtcgtcgtcgccggcactcctccggacacc
aaagccactccatgggtcgagaagtaccgccctcagtcccttaccgacgtcgctgctcat
cgcgacatcatcgacaccattgataggcttaccagcgagaacaaattgccacatttgttg
ctttacgggcctccaggaacgggcaagacgtcaaccattctcgcggtggctcgcaagctc
tatgggtcacagatgcacaacatggttttggagttgaatgcctcagatgaacgtggaatc
gatgttgtgaggcaacagattcaggatttcgctagtactcagagcttctcatttggccca
aaatcatcagtgaagttggtcttattggatgaggccgatgccatgacaaaggatgcacaa
tttgccctacgtcgagtgattgagaagtataccaaaaacactaggtttgctcttatctgt
aatcatgtcaacaagattattccagctctgcaatcaagatgtactcgatttcggtttgct
cctcttgatgccattcatgtctctgagagactcaaacatgttattcaggctgaagggctt
gatgtatctgagagtggtttagtggcacttgtacgacttagcaatggtgacatgagaaag
gctttgaacatttttcagtcaacacacatggcttcccagcagataacagaagaagctgtc
tacatatgcactggaaatccattgccgaaagacattgagcaaatatcttactggcttctg
aatgaaacatttgcagagagttttaaacgaatatctgctgtgaagacaaggaaaggatta
gctttggtggatattgtaagagaagtaaccatgtttgtctttaagatcaagatgccatca
gatgttcgaattcagctaatcaatgacttggctgatatcgaatacaggttgagttttggg
tgcaatgataagttgcagctgggctcgctcattgctacctttacacgggctcgagctgct
ctggttgcagctgcaaagtag
DBGET
integrated database retrieval system