Actinidia eriantha (wild kiwifruit): 130788250
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Entry
130788250 CDS
T09464
Name
(RefSeq) polyadenylate-binding protein 6-like
KO
K13126
polyadenylate-binding protein
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130788250
09123 Folding, sorting and degradation
03018 RNA degradation
130788250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130788250
03041 Spliceosome [BR:
aew03041
]
130788250
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130788250
mRNA cycle factors
Stress granule specific factors
130788250
Spliceosome [BR:
aew03041
]
Complex C
Other components
Complex C specific factors
130788250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_DEAH11
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130788250
NCBI-ProteinID:
XP_057504778
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All DBs
Position
11:15514342..15518334
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AA seq
586 aa
AA seq
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MAAPPPPAVALGKASLYVGDLDPQVTEMDLVKAFNKMGPLVSVRLCRDRLSQQSLRYGYI
NFFSPSDASKALACLNHTELKGKPMRVMWCQRDPLTRKTGVGNVFIKNLDPSITSARLEG
IFCKFGTILSCKVAEERGKSKGFGFVQFVSEDSSMAAVNALHGTMIDGKELYVSKFVKKN
ERKKAYEEPKFTNLYVKNLGEDVTEDTLREKFSEFGKVRNVLVMKDAEGKSKGFGFVNFE
SHEEAKTAVEALNGAVIGSEKLFVGKAQKKAERKELLKREYKEMTNRNIVKSKASNLYVK
NLDVSIDDRNLEEHFSSFGKVTSAKVMRHDNGVHKGFGFVSFSTPDEAKKALDALHGTIF
QGRSLYVAIAQPKEERNRELLSYYAQYPLPSLYSSDSDIFSSRFLQTYYSFPPFPMLNPV
SSLHSHQPIMYQDYGKSKGEVYSYMPQSHQRNVFTYIPERSQQRSYVDYVYQHPMGYPNC
SVAVGELRNDLNTSWNKRSRSAAFFKQAVAKKGITPAPSFGKYKQNLRGFLQPGVENLQP
GRMFEMHHSDAHKLLKLPMPSAVQVLKDANSRIISDGNVAQLAKSA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccaccaccaccggcggtggctcttggaaaggcgtctctgtacgtgggcgat
ctggacccacaagtgacggagatggacctcgtaaaagctttcaataaaatgggtccactc
gtctctgttcgcctctgcagagaccgactctcccaacaatccctccgctatggctacata
aacttcttctctccctctgatgcttctaaggctcttgcttgtctgaaccacacggaattg
aagggaaaaccgatgagagtaatgtggtgtcaaagagaccctcttacaagaaagaccggc
gttggcaatgtcttcatcaagaaccttgacccttccattaccagtgctcgcttggaggga
attttctgcaaattcggaactattctttcttgcaaggtagccgaagaacgagggaagagc
aagggttttgggttcgttcagttcgtttcagaggattcgtccatggctgctgtcaatgct
ctccacggtaccatgattgacgggaaggaattatacgtgtcgaaatttgtcaagaaaaat
gagaggaagaaagcctatgaagaaccaaaatttacaaatttgtacgtgaagaatttgggt
gaagatgtgacagaagatacccttcgggaaaagttttctgagttcgggaaggtccgcaat
gttttggtcatgaaagatgctgaaggcaaatcaaagggttttggatttgtcaactttgag
tcacatgaagaggctaagacggctgtggaggcattgaatggtgcagtaataggatcggag
aagttgtttgttggaaaggctcagaagaaggctgaaaggaaagagcttctaaaacgcgaa
tacaaggagatgaccaatcgcaatattgtgaagtcaaaggcttcaaatctgtatgtgaag
aatttggatgtgtctattgatgacagaaatctggaagaacatttcagttcttttggaaag
gtgacttcagcaaaagtgatgcgtcacgataatggggtccataaaggatttggctttgtg
agcttctccactcctgatgaagcaaagaaagctttggatgcacttcatggaacaattttc
caaggaaggtctctgtatgtggctatagctcaacctaaagaagaacgcaatagagaactg
ctgagttactatgcccaatatccgctgccgtctctctattcttctgattcagatatcttt
agctctcgattccttcaaacttattacagtttccctcctttcccaatgctgaaccctgtc
tcaagccttcattcacaccagccaattatgtatcaagattatggtaaaagcaagggtgaa
gtatattcttatatgccacagagtcaccagagaaatgttttcacatacattcctgaaaga
tcacaacaaaggagctacgtggactatgtttaccaacatccaatgggatatcccaactgt
agtgtagcggtcggagagcttcgcaatgatctgaatacatcctggaacaagagaagtaga
tctgcagctttctttaaacaggctgtggctaaaaaaggtattactccagcaccgtccttt
ggaaagtacaagcaaaacctcaggggatttctccaacctggggttgagaatcttcagcct
gggcgtatgtttgaaatgcaccattctgatgcccataagctactaaaactgccaatgccc
tcggcagtccaagtgctgaaggatgcaaattctcggattatctcagatggtaatgttgct
caactagctaagtctgcctga
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