KEGG   Actinidia eriantha (wild kiwifruit): 130788458
Entry
130788458         CDS       T09464                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
aew  Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:aew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aew03036]
    130788458
   03400 DNA repair and recombination proteins [BR:aew03400]
    130788458
Chromosome and associated proteins [BR:aew03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    130788458
DNA repair and recombination proteins [BR:aew03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130788458
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HSM3_C
Other DBs
NCBI-GeneID: 130788458
NCBI-ProteinID: XP_057505105
LinkDB
Position
11:complement(15330141..15356073)
AA seq 1171 aa
MADSAHWVKHIEAYVDSSSSPSQQGASLDAIAALLKNDMLTIEALVREMEMYLTTTDNII
RGRGILLLAELLERITLKPLDDASIRSLIGFFTERLADWKALRGALLGCLALMKRKSKVG
MVTLGEARAVAQSYHENLQVQSLGQHDRKLCFELLECLVDHYPDAVTALMFLVLHHNFFS
FGATSKDDSFVYGICEAIDGEKDPRCLMITFHIVNVLSRLFPDPAGPVASYAEDLFEILG
RYFPIHFTHAKDEEVDVTRDELSRALMLAFASTPLFEPFAIPLLLEKLSSSLPSSKVESL
RYLSYCSVMYGADRMARHVETLWSSLRDAIFNSLEPISSLESEPLNIMGFRENEVATEAL
LLLQKVVLQNDGSFLSLIVGDEEVNLTIKSITDFKNYTDIPLHYKKKLHAVGRILYASAR
ASIASCNKVFESFFLCLMDALGLSGSSKDSHPEDDYMISGRLNYGALCLCIELLAACRYL
VLDSEELSLTAVSAHETWCCMLQSFCHSLTEAFCCTLITSTYEDVQNAYARAGVRGLQIL
ATFPGSFLPVSKSIFKNILTRLMSVITLNADKAFLWKLSLKALVEIGSFVDNDHESDRAP
SFKGLVVEKIISLMSPGDSTMPLSLKLEAISEIGSTSLNFMLAIVQGLENAVFANLSNSF
VHGNVDSAEAAVELLGCFSIKLLPWFDKIGGFEEVPFQFAINVWDHIGKSTVFSIALQDK
ELIGATMTTVKLAVANCSEESQSIIIQKALNVLSSCTSFLSKESICGVTTTELEASRLNH
GLNSFPCRDKWVVSLFASVIIALRPQTKIPNVELVLHVFITTLLSGYVPAAQALGSIVNK
LPLKTNATDTSDSCSLEAALDIIFSTSLWTSDDNSLLRRCRGDGNEIGLSCLRLSNSSSR
LLEVHAIVGLAWIGKGLLMRGHGKVKDITKTILSYLLSDSDSVELSLKQNTLKDGTPQDV
LSLMKSAADAFHVLMSDSETCLNRRFHAVIRPLYKQRYFSTMMPILLSSVAKSDLSITRS
MLYRVFAHIISDTPLSAILTEAKKLIPILLDSLSILSEDISDKDVIYNVLLVLSGILTDK
NGQEAVVENVHMIIGRLLGLISYPHMMLVRETVIQCLVAMSVLPHAKIYPMRTQVLRAIS
NALDDPKRAVREEAVRCRQAWASIATRSLHF
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggccgattccgctcattgggtgaagcacatagaggcgtacgtcgactcttctagctcg
ccgtctcagcagggtgcaagtttagatgcaattgctgcactcttgaagaatgacatgcta
actatagaagcacttgttagagagatggagatgtatttaactactacagacaacattatt
cgtggaagaggtatacttcttcttgcagagttgctggaacgtataacattaaaaccttta
gatgatgcttctatacgtagcttgataggattcttcacagagaggctggcagattggaag
gccttgcgtggtgcacttcttggttgcttggcactaatgaagaggaaaagtaaagttggt
atggttactcttggcgaagcaagagcagttgcccagtcctatcatgaaaacttacaggtg
caatccttgggacaacatgataggaagctctgctttgaactcctggagtgcctagtagat
cactatcctgatgcagttacagcactgatgtttctggttcttcaccataatttcttttca
tttggtgcgacttccaaagatgatagctttgtctatggaatctgcgaagctattgatgga
gaaaaggatccacgatgcctaatgatcacatttcatattgtgaacgttctgtcacgatta
tttccggatccagctggtccagttgccagttatgcagaagatctttttgaaattttggga
cgttacttccctatccattttacacatgcaaaagatgaagaggttgatgtgacaagggat
gagctgtcaagggcactaatgctggcgttcgcttctacacctctctttgagccatttgca
attccgttgcttcttgaaaaactttcttcttctctgccgtcatcaaaggtagagtctttg
aggtatcttagctattgcagtgtgatgtatggagcagacagaatggcacgacatgttgaa
actctttggtcttcgttaagagatgcaatttttaattcattagagcccatttcatccttg
gagtcagaaccactgaatattatgggtttccgtgagaatgaagttgcaactgaagctctc
ctacttctgcaaaaggttgttctgcaaaatgatggctcgttcttaagtttgattgttggt
gatgaagaagtaaacttaactatcaagtccatcacagattttaagaattacactgatatt
cctttgcattacaagaagaaactacatgcagttggtagaatattatatgcttctgccaga
gcttccattgcttcctgcaataaagtgtttgaaagtttcttcctatgcttaatggacgct
ttggggctttcgggttcatccaaggatagtcatccagaggatgattatatgatttctgga
agacttaattatggagccctatgtctctgcatcgaactccttgctgcatgcagatatttg
gttttagactctgaagaacttagtttgactgctgtgtctgcacatgagacatggtgttgc
atgcttcagagtttttgccactcattaactgaagccttctgttgtacattaataacaagt
acatatgaagacgttcagaatgcttatgctcgcgctggagtgaggggtttgcagattttg
gcaacatttcctggaagcttcttacctgtgtcaaaatccatattcaaaaatattttgacg
aggttgatgtcagtaatcactttgaatgccgacaaagcatttttgtggaagttgtcattg
aaggcattagtggaaattggctcatttgttgataatgatcatgagtctgacagggcacca
agctttaagggtcttgttgtagagaagattatctcattgatgtctccgggtgattctaca
atgcctttatcactcaaacttgaagcaatttctgagattggctcaaccagcctgaatttt
atgctggcaattgtccaagggttggaaaatgctgtatttgccaatttatctaactctttt
gtacatggaaatgttgactcagctgaagccgctgttgagcttttgggatgtttctctatt
aagctgcttccatggtttgataaaattggagggtttgaggaagtcccattccagtttgcc
attaatgtgtgggatcacattggaaaaagcactgttttcagcattgcacttcaggataaa
gaactcattggtgcaacaatgacaacagtgaagctagctgttgcaaattgttccgaggaa
agtcaaagcatcattatacaaaaagccttaaatgtactttcatcatgtacttctttccta
tcaaaggagtccatatgtggtgtcactacaaccgaacttgaagcttcacggcttaatcat
ggtttgaatagctttccatgtagagacaaatgggtagtttccttgtttgcttcagttatc
atagctcttcgtcctcaaacaaagataccaaatgtagaacttgtattgcatgtttttata
acaaccctcctcagtggttatgttcctgcagctcaggccttgggttccattgttaacaaa
ctacctctaaaaaccaacgcaacggacacctctgatagttgtagtttagaagcagcactg
gatataatctttagcactagcctgtggacatctgatgataatagtcttttaaggagatgc
agaggcgatggcaatgagattggtctaagttgtttaagactaagtaattcaagcagtagg
ttgcttgaagttcatgccattgtcggactagcttggattggaaaaggtctgcttatgcga
ggtcatggaaaagttaaagacataactaagactattctaagttatttactatcagacagt
gatagtgtagaattgtcgttgaagcagaatacgttaaaagacggcactccgcaggatgta
ctttctctgatgaaatctgcagcagatgcatttcatgttcttatgagtgattctgagact
tgtttgaacagaagatttcacgcagtcattcgaccactctataagcaacgctatttctct
accatgatgcccattcttctatcttcagtggcaaaatctgatttatcgatcacaagatcc
atgctgtatagagtctttgcacatattatatctgatactccactcagcgctatcttgact
gaagctaagaagctcatccccatattactggatagcttatccattttgagtgaggatata
tcggataaagacgtaatatacaatgtcctcctagtattgtctggaatattgactgacaaa
aatggacaagaagctgttgtggagaatgtacatatgattattggtcgtcttcttgggctt
atctcctacccccatatgatgcttgttcgtgagacagtaattcagtgccttgttgccatg
tctgtgctgccccatgcaaagatatatcccatgagaacacaggtattacgagctatatca
aatgctcttgatgatccaaaaagggctgtacgggaagaagctgtcagatgtcggcaagca
tgggcgtcaattgcaactagaagtcttcatttttga

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