Actinidia eriantha (wild kiwifruit): 130789560
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Entry
130789560 CDS
T09464
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03082
ATP-dependent chromatin remodeling
aew03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130789560
03083 Polycomb repressive complex
130789560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aew03036
]
130789560
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
130789560
Histone modification proteins
HAT complexes
HATB complex
130789560
HDAC complexes
Sin3A-HDAC complex
130789560
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
130789560
PRC2.2
130789560
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
130789560
Heterochromatin formation proteins
Other heterochromatin formation proteins
130789560
Chromatin remodeling factors
NuRD complex
130789560
NuRF complex
130789560
NuRF complex (fruit fly)
130789560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_DCAF12
EIF3I
Beta-prop_IFT122_1st
WDR55
WD40_MABP1-WDR62_2nd
eIF2A
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
130789560
NCBI-ProteinID:
XP_057506328
LinkDB
All DBs
Position
12:1196314..1204313
Genome browser
AA seq
492 aa
AA seq
DB search
MEEASPTPRKRGRPRKDKPKEEREREEPAAAEKMRERTDKKSHHSSVVDEKYVQWKSLVP
VLYDWLANHNLLWPSLSCRWGPQLEQGKFKNRQRLYLSEQTDGSVPNTLVIANCEVVKSR
VAAADHVSEFNEEARSPFVKKYKTIIHPGEVNRIRELPQNNSIVATHTDCPEVLIWDVEA
QPNRHAVLGAVDSRPDLVLTGHQENAEFALAMCPAEPFVLSGGRDKSVVLWSIHDHVSTL
TTDAATKSPRSSGSIIKAADNSSVGPRGIFQGHKDTVEDVQFCPSSAQEFCSVGDDSCLI
LWDARVGSSPVVKVEKAHNGDLHCVDWNPHDQNLILTGSADHSVCMFDRRNLTSDGVGSP
IHKFEGHKAAVLCVQWSPDRSSVFGSSAEDGLLNIWDYDKVGKKKEHAARTPNSPPGLFF
QHAGHRDKVVDFHWNSADPWTVVSVSDDCETSGGGGTLQIWRMSDLIYRPEEEVLAELEK
YKSHVIECTSKS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcatcgccaacgccgagaaagagaggaaggccgaggaaagataagcccaag
gaggagagagaaagagaagaacctgctgcagcggagaagatgagagagagaaccgacaag
aagagccaccactcttccgttgttgacgagaagtacgtccagtggaagtcactcgtccct
gtcctctacgactggctcgccaatcacaacctcctttggccctctctctcgtgccggtgg
ggtccacaacttgaacaagggaaattcaagaatcgacaacgtctctacctttctgagcag
accgatggcagtgttccaaatactctggttatagcaaattgtgaagttgtcaaatctagg
gttgcagctgcggatcacgtatcggagttcaatgaagaagcacgctcccctttcgtgaag
aaatacaaaactatcatacatcctggggaggtgaacagaatcagggaacttccacaaaac
aatagcatagttgctacccatactgactgtcctgaagttctcatttgggatgtcgaagcc
caaccaaaccgtcatgctgtccttggagctgtcgattctcgtccggatttggtattgact
ggacatcaagagaatgcagaatttgctcttgctatgtgtcctgctgaaccttttgtgctc
tctggagggagggacaagtctgttgttttatggagtatacatgatcatgtatccacattg
accacagatgcagccaccaagtctccaagatcttctggatcaatcattaaagctgctgat
aattcttctgtcgggccacgtggaatcttccaggggcacaaggacacagttgaagatgtg
cagttctgtccgtcaagtgcacaggagttttgtagcgtaggcgatgattcttgcctaata
ttatgggatgcacgagttggctctagcccagttgtcaaggttgaaaaagcacataatggt
gatcttcattgtgttgattggaatcctcatgatcaaaaccttattttaactgggtccgca
gatcattctgtttgcatgtttgatcgtcgaaatcttacttctgatggagtagggtctccc
atccataagtttgaaggtcacaaagctgctgttctctgtgtgcagtggtcacctgacagg
tcgtctgtctttggaagttctgcggaagatggtttattaaatatttgggattatgacaag
gttggtaaaaagaaggaacatgcggcaagaacgccaaattctcctccaggattgtttttc
caacacgctgggcacagggacaaagttgtagacttccactggaattcggctgatccatgg
acagtcgttagtgtatctgatgactgcgaaacctctggtggtggtggaaccctacagata
tggcgcatgagcgatttgatttacaggcctgaagaggaggttttagccgagctcgagaaa
tataagtctcacgtgattgaatgtacttccaagtcttaa
DBGET
integrated database retrieval system
