Actinidia eriantha (wild kiwifruit): 130789926
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Entry
130789926 CDS
T09464
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130789926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130789926
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130789926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
130789926
NCBI-ProteinID:
XP_057506695
LinkDB
All DBs
Position
12:complement(6696260..6713698)
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AA seq
937 aa
AA seq
DB search
MSREAMEVDPSQKVEALQSFASGPLSSSIAKLSGSSRGLPSDKDFHFYYNFDEFKVPMKE
IADSSQLILSSIGSSAHFWGKEMGFPEDLDDAYDWLVNVNDEVFERFDESVDEFQKVRKK
EEESGVRVMNSGDLEDGFQLVCGKKKTRSSLVEKDLGKDMSSSSGVTVASRDKKTMGAKP
KVPFHIPTIRRPQDEFKIVVNNSNQPFEHVWLQRSDDGSRFIHPLEKFSILDFVDKNVEH
VELVKPPPIESTPFKLVEEVKDLKELAAKLRGLNEFAVDLEHNQYRSFQGLTCLMQISTR
TEDFVIDTLKLRIHIGPHLREVFKDPMKKKVMHGADRDIMWLQRDFGIYVCNMFDTGQAS
RVLKLERNSLEYLLYHFCGVTANKEYQNADWRLRPLPDVMLRYAREDTHYLLHIYDLLRI
RLLSESTESEKSDDLLVEVYKRSYDICMQLYEKELFTDSSYLFIYGLQGADLNAVQLAIV
AGLCEWRDVVARAEDESTGYVLPNKTLLEIAKQIPSSTGKLRRLVNSKHPYVECNIGSVV
SIIRHSILNAAAFEAAVELLKEARMQTASEEHVVSADGNEALPTEAPATLETVIAAQGSG
GGISLNDSTSEHPPASVLLKESLEFGDDTAEIGRNKQESASEHAAQNGHGLRQVDNKITE
LPTGSPIISGKAAGASVQVLKKPSRAFGAILGNSSAKRKFGPDKKEKEEIKLEQIKSSVN
LPFHSFVPRAEQLQPPVKEPPKMLESTPCVEPSPIQAASVEDVILLSSDEETEDSSNNEK
AESSAKRDETGESVSNEAIKEPVEHREDKTLASAQEMDEDGTMSLGDLSSSFQDCFKSIN
ETRKPKRAEKSIESGGFLQLKPFDYESARKEVRFGEHREAGLGEEGDDGHRTRRGKVDRK
KSSGVGQSHKDDEMGDFQQGRRRQAFPASGNRSATFR
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagaggctatggaggttgatccgtctcagaaagtcgaggctttacagagcttc
gcgtcaggtccattgtcgtcttccatagcgaagctctcgggttcgtctcggggcttacca
tccgataaagacttccatttctactacaatttcgatgaattcaaagtcccaatgaaagaa
atcgctgattcgtcgcaattgattctgagttcgattgggtcttcggcgcatttttggggg
aaagagatggggtttccggaggatttggacgacgcgtacgattggcttgtgaatgtgaac
gatgaagtttttgagaggttcgatgagtcggtggatgagtttcagaaggtgaggaagaag
gaggaggagagtggggtgagagtgatgaattcgggggatttggaagatggctttcagttg
gtttgtgggaaaaagaagacgcggtcgagtttggtggagaaagatttggggaaagatatg
agttcttcgtctggtgtgacggtggcttcgagggataagaagacgatgggggcaaagccc
aaggttccctttcatatacccacaattcgtcgcccgcaggatgagttcaagattgtggtt
aataattcgaatcagccgtttgagcatgtttggttgcagaggagtgatgatggatccagg
tttatacatccactggagaagttctctattttggattttgttgacaaaaatgtagagcat
gttgagctggtgaaaccacctccaattgagtccactcctttcaaactcgtggaagaagtt
aaagatttgaaagagttagctgctaagttacgtggcttaaatgaatttgctgttgatttg
gaacacaatcaatatcgatctttccaaggattgacttgtctaatgcaaatctcaactcga
actgaggattttgttattgatactctaaagcttcgcattcatattggtcctcatctgagg
gaagttttcaaagatcctatgaagaaaaaggtcatgcatggagcagatcgtgatataatg
tggctccaaagggactttggcatatatgtctgcaatatgtttgacactggacaggcctca
agggtattgaaattggaaaggaatagtctggagtatcttttgtaccacttttgtggagtt
actgctaacaaggaataccagaatgcagattggagacttcgccctttacctgatgttatg
ctcagatatgccagagaagatacacactatctgttgcatatttatgatctattaagaatc
aggttgctctcggaatcaactgagtcagaaaaatctgatgacctgctggtagaggtgtac
aagcgcagttatgatatatgcatgcagctttacgaaaaagagcttttcacagatagttca
tatctcttcatatatggtttgcagggtgctgatctgaatgccgtgcagcttgctattgtt
gcaggactttgtgaatggagagatgttgttgctcgtgcagaggatgaaagcactggttat
gtattgccgaacaaaactcttcttgagattgccaaacagattccttccagcactggcaag
ctgcgccgtttggtgaattcgaagcacccatatgtagagtgtaatattggttctgttgtc
agcataattaggcattcaattctgaatgctgctgcatttgaagctgctgtagagcttcta
aaggaggcgcgtatgcaaacggcatctgaagaacacgtcgtgtctgcggatggaaatgaa
gccctacccactgaagctcctgcaacattagaaactgtgatagcagcacaaggtagtggt
ggtggcatttcattaaatgatagcacgtcagagcatcctccagcttctgtgcttttgaag
gaatctttggagtttggagacgataccgctgaaattggcagaaataaacaagaaagtgct
tcagaacatgctgctcaaaatgggcatggattgaggcaagtggataacaaaattactgag
cttcccacaggaagccccatcatttcagggaaggctgctggagcaagtgttcaggtgcta
aagaagccaagccgcgcttttggggcaattctgggcaattcttcagcgaagaggaagttt
ggtcctgataaaaaagagaaggaagagatcaagttggagcagatcaaatcttcagtaaac
cttccattccattcatttgtgcccagggccgaacagttgcaaccacctgtaaaagagcct
ccaaaaatgctggaaagtacgccatgcgtagaaccttctcccattcaagctgcaagcgtg
gaagatgtcatattgttatcaagcgatgaagaaactgaggattcatcaaacaatgaaaaa
gctgagtcgtcagcaaaacgcgatgaaaccggggaatcagtaagcaatgaagccataaag
gaaccggtggagcacagggaagacaaaactctagcatctgctcaggaaatggatgaggat
gggaccatgtctcttggtgatctatcctccagcttccaagactgcttcaagtcaataaat
gaaacaagaaaacctaagcgagcggagaagtccatagaatctggcggattcttgcagttg
aaaccattcgattatgaatccgcaagaaaagaggttaggtttggggaacatcgagaagct
ggattgggggaagagggtgacgacggtcacaggactaggcgtggtaaagtggatcggaaa
aagagttcaggtgtcggtcagtcccataaagatgatgagatgggggatttccagcagggt
agaaggcgccaggcttttccggcaagtgggaacagaagcgcaactttccgttga
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