KEGG   Actinidia eriantha (wild kiwifruit): 130789926
Entry
130789926         CDS       T09464                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130789926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130789926
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     130789926
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 130789926
NCBI-ProteinID: XP_057506695
LinkDB
Position
12:complement(6696260..6713698)
AA seq 937 aa
MSREAMEVDPSQKVEALQSFASGPLSSSIAKLSGSSRGLPSDKDFHFYYNFDEFKVPMKE
IADSSQLILSSIGSSAHFWGKEMGFPEDLDDAYDWLVNVNDEVFERFDESVDEFQKVRKK
EEESGVRVMNSGDLEDGFQLVCGKKKTRSSLVEKDLGKDMSSSSGVTVASRDKKTMGAKP
KVPFHIPTIRRPQDEFKIVVNNSNQPFEHVWLQRSDDGSRFIHPLEKFSILDFVDKNVEH
VELVKPPPIESTPFKLVEEVKDLKELAAKLRGLNEFAVDLEHNQYRSFQGLTCLMQISTR
TEDFVIDTLKLRIHIGPHLREVFKDPMKKKVMHGADRDIMWLQRDFGIYVCNMFDTGQAS
RVLKLERNSLEYLLYHFCGVTANKEYQNADWRLRPLPDVMLRYAREDTHYLLHIYDLLRI
RLLSESTESEKSDDLLVEVYKRSYDICMQLYEKELFTDSSYLFIYGLQGADLNAVQLAIV
AGLCEWRDVVARAEDESTGYVLPNKTLLEIAKQIPSSTGKLRRLVNSKHPYVECNIGSVV
SIIRHSILNAAAFEAAVELLKEARMQTASEEHVVSADGNEALPTEAPATLETVIAAQGSG
GGISLNDSTSEHPPASVLLKESLEFGDDTAEIGRNKQESASEHAAQNGHGLRQVDNKITE
LPTGSPIISGKAAGASVQVLKKPSRAFGAILGNSSAKRKFGPDKKEKEEIKLEQIKSSVN
LPFHSFVPRAEQLQPPVKEPPKMLESTPCVEPSPIQAASVEDVILLSSDEETEDSSNNEK
AESSAKRDETGESVSNEAIKEPVEHREDKTLASAQEMDEDGTMSLGDLSSSFQDCFKSIN
ETRKPKRAEKSIESGGFLQLKPFDYESARKEVRFGEHREAGLGEEGDDGHRTRRGKVDRK
KSSGVGQSHKDDEMGDFQQGRRRQAFPASGNRSATFR
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgagcagagaggctatggaggttgatccgtctcagaaagtcgaggctttacagagcttc
gcgtcaggtccattgtcgtcttccatagcgaagctctcgggttcgtctcggggcttacca
tccgataaagacttccatttctactacaatttcgatgaattcaaagtcccaatgaaagaa
atcgctgattcgtcgcaattgattctgagttcgattgggtcttcggcgcatttttggggg
aaagagatggggtttccggaggatttggacgacgcgtacgattggcttgtgaatgtgaac
gatgaagtttttgagaggttcgatgagtcggtggatgagtttcagaaggtgaggaagaag
gaggaggagagtggggtgagagtgatgaattcgggggatttggaagatggctttcagttg
gtttgtgggaaaaagaagacgcggtcgagtttggtggagaaagatttggggaaagatatg
agttcttcgtctggtgtgacggtggcttcgagggataagaagacgatgggggcaaagccc
aaggttccctttcatatacccacaattcgtcgcccgcaggatgagttcaagattgtggtt
aataattcgaatcagccgtttgagcatgtttggttgcagaggagtgatgatggatccagg
tttatacatccactggagaagttctctattttggattttgttgacaaaaatgtagagcat
gttgagctggtgaaaccacctccaattgagtccactcctttcaaactcgtggaagaagtt
aaagatttgaaagagttagctgctaagttacgtggcttaaatgaatttgctgttgatttg
gaacacaatcaatatcgatctttccaaggattgacttgtctaatgcaaatctcaactcga
actgaggattttgttattgatactctaaagcttcgcattcatattggtcctcatctgagg
gaagttttcaaagatcctatgaagaaaaaggtcatgcatggagcagatcgtgatataatg
tggctccaaagggactttggcatatatgtctgcaatatgtttgacactggacaggcctca
agggtattgaaattggaaaggaatagtctggagtatcttttgtaccacttttgtggagtt
actgctaacaaggaataccagaatgcagattggagacttcgccctttacctgatgttatg
ctcagatatgccagagaagatacacactatctgttgcatatttatgatctattaagaatc
aggttgctctcggaatcaactgagtcagaaaaatctgatgacctgctggtagaggtgtac
aagcgcagttatgatatatgcatgcagctttacgaaaaagagcttttcacagatagttca
tatctcttcatatatggtttgcagggtgctgatctgaatgccgtgcagcttgctattgtt
gcaggactttgtgaatggagagatgttgttgctcgtgcagaggatgaaagcactggttat
gtattgccgaacaaaactcttcttgagattgccaaacagattccttccagcactggcaag
ctgcgccgtttggtgaattcgaagcacccatatgtagagtgtaatattggttctgttgtc
agcataattaggcattcaattctgaatgctgctgcatttgaagctgctgtagagcttcta
aaggaggcgcgtatgcaaacggcatctgaagaacacgtcgtgtctgcggatggaaatgaa
gccctacccactgaagctcctgcaacattagaaactgtgatagcagcacaaggtagtggt
ggtggcatttcattaaatgatagcacgtcagagcatcctccagcttctgtgcttttgaag
gaatctttggagtttggagacgataccgctgaaattggcagaaataaacaagaaagtgct
tcagaacatgctgctcaaaatgggcatggattgaggcaagtggataacaaaattactgag
cttcccacaggaagccccatcatttcagggaaggctgctggagcaagtgttcaggtgcta
aagaagccaagccgcgcttttggggcaattctgggcaattcttcagcgaagaggaagttt
ggtcctgataaaaaagagaaggaagagatcaagttggagcagatcaaatcttcagtaaac
cttccattccattcatttgtgcccagggccgaacagttgcaaccacctgtaaaagagcct
ccaaaaatgctggaaagtacgccatgcgtagaaccttctcccattcaagctgcaagcgtg
gaagatgtcatattgttatcaagcgatgaagaaactgaggattcatcaaacaatgaaaaa
gctgagtcgtcagcaaaacgcgatgaaaccggggaatcagtaagcaatgaagccataaag
gaaccggtggagcacagggaagacaaaactctagcatctgctcaggaaatggatgaggat
gggaccatgtctcttggtgatctatcctccagcttccaagactgcttcaagtcaataaat
gaaacaagaaaacctaagcgagcggagaagtccatagaatctggcggattcttgcagttg
aaaccattcgattatgaatccgcaagaaaagaggttaggtttggggaacatcgagaagct
ggattgggggaagagggtgacgacggtcacaggactaggcgtggtaaagtggatcggaaa
aagagttcaggtgtcggtcagtcccataaagatgatgagatgggggatttccagcagggt
agaaggcgccaggcttttccggcaagtgggaacagaagcgcaactttccgttga

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