Actinidia eriantha (wild kiwifruit): 130789989
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Entry
130789989 CDS
T09464
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
aew03440
Homologous recombination
aew03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130789989
03420 Nucleotide excision repair
130789989
03430 Mismatch repair
130789989
03440 Homologous recombination
130789989
03460 Fanconi anemia pathway
130789989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aew03000
]
130789989
03032 DNA replication proteins [BR:
aew03032
]
130789989
03400 DNA repair and recombination proteins [BR:
aew03400
]
130789989
Transcription factors [BR:
aew03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130789989
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130789989
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130789989
MMR (mismatch excision repair)
130789989
DSBR (double strand breaks repair)
HR (homologous recombination)
130789989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
130789989
NCBI-ProteinID:
XP_057506796
LinkDB
All DBs
Position
12:797377..800793
Genome browser
AA seq
626 aa
AA seq
DB search
MPVNLTQNAISAINAGDLNSKPLVQVLDIKLIGNSQERYRLVLSDGMLTEHAMLATQLND
RVKSGRVRKGSVVQLIDYICSTVQNRKIIVVLNMETIIPNCEIIGNPTRFLESDSVDQNP
EPDNNCGRPTMHTVNNNNLSVRNAGNNMQSFRPSVQPPYQPPPNYKNHGAIMKNEAPARI
IPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFDLLDSDGGEIRATCFNAVVD
RFYDTIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCPDEDGSIPQQQFSF
RPISDIEIAENNSIFDVIGVVTIVNPSVPILRKNGMETQRRILNLKDQSERSVELTLWGD
FCNREGQQLQEMVDSGLSPVLAVKAGKVNDFSGKSIGTISSTQLFINPDSPEAHRLRVWF
DRGGKNTVSQSISRDIMPGGPKNEIRKSVSQIKDEGLGRSDKPDWVTVKATISFIKTDTF
CYTACPLMIGDRQCNKKVTKSGNSRWQCDRCNQDFDECDYRYLLQAQVQDHTGLTWVTAF
QESGEEILGCSAKELYSLKYEEQDDVRFVEIIRGCLFTKYLFRLKIKEEMYGDEQRVKIT
VVKAEKVNYSAETKHLLDLVLKVHTR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctgacgcagaacgcgatttcggcgataaacgccggggacctgaactcg
aagccgctggttcaggtcctggacatcaagctcatcggaaattctcaggaacggtaccgt
ctcgtgctctccgacggaatgttgactgagcacgcgatgctggcgactcagctcaacgac
cgagtcaagtccggccgagtccgcaagggctccgtcgttcaactcatcgattatatatgt
agcaccgttcagaatcgcaagattattgttgttctaaatatggaaactattatacccaat
tgtgaaataattgggaatccaacaaggttcttagaatctgattcagtagatcaaaatcca
gaacctgataacaattgtgggcgcccaactatgcatactgttaataataataatctgagt
gtccgaaatgctggaaacaacatgcagagtttccgcccatctgttcaacctccataccaa
cctcctccaaattacaaaaaccatggggcaatcatgaagaatgaagcaccagcacgcata
attccaattgctgctttgaatccttatcaaggtcggtgggcgatcaaggcaagagtaact
gcgaaaggagacatacgccggtacaacaatgcccgaggagatgggaaggtcttctccttt
gaccttctcgactctgatggtggtgaaataagagctacctgcttcaatgcagttgttgac
cgcttctatgatactatagaggttggtaaagtctacttgatatcaaagggtagcttgaaa
cccgcacagaagaacttcaaccatctgaaaaatgaatgggagatatttttggaagcaact
tcaacagttgatctttgcccagatgaagatggttctataccacaacagcaattctccttc
agacctatcagtgatattgagattgctgaaaataattccatttttgacgttattggtgtc
gtgacaattgtgaatccttcagtccctatcttgaggaagaatggtatggaaactcagaga
agaattctaaatctgaaggaccaatctgagcggagtgttgaattaactctatggggcgat
ttctgcaatagggaaggtcaacagctgcaagaaatggtcgactctgggctttcccctgtt
ttagctgtcaaagctggtaaagttaatgacttcagtgggaaatcgatagggacaatttct
tctacccagctcttcataaacccagattctccggaggcccatcgcttgagagtttggttt
gatcgaggtggtaaaaacaccgtttctcaatccatctctagagacattatgccaggagga
ccaaagaatgagattcgcaaatctgtgtctcagatcaaggacgaaggcttgggaagatct
gataaaccagactgggttacagtgaaggcaaccatatctttcatcaagacggacacgttc
tgctacacagcttgcccgttgatgattggagatagacagtgcaataagaaagtgacaaag
tcgggtaattcaagatggcaatgtgacaggtgcaatcaggacttcgacgagtgtgattac
agataccttcttcaagctcaagttcaggaccacacagggttgacgtgggtgacagctttt
caggaatcaggggaagagatcttgggttgttcggcaaaggagttatactccttgaaatat
gaagaacaggacgatgtcaggtttgtggaaataatccgtggctgcctcttcaccaaatat
ctttttaggcttaaaatcaaggaggaaatgtacggtgatgaacagagggtgaaaattacg
gttgtcaaggcagagaaggtgaactattctgcggaaaccaaacacctgcttgatttggtt
ttgaaggttcatactcgctga
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