Actinidia eriantha (wild kiwifruit): 130790046
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Entry
130790046 CDS
T09464
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130790046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130790046
Enzymes [BR:
aew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130790046
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
130790046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Sigma54_DBD
Motif
Other DBs
NCBI-GeneID:
130790046
NCBI-ProteinID:
XP_057506892
LinkDB
All DBs
Position
12:complement(3425081..3468278)
Genome browser
AA seq
1696 aa
AA seq
DB search
MAHATEGVSESVEAVRFSFMTDEEVRRHSVVKITNPILLDSVVRPVPAGLYDPAMGPLDD
HSPCKSCGQRSFHCPGHCGHIDLVTPVYNPLLFNMLHNLLQRTCFFCLHFRASRSEVEKR
AAQLELIAKGDIVRAKSLDSISPSESIDPGDSDGSHVSCSTVHSAAETYNSEHSNQGWTS
VQFIEAMAILNKFLKPRSTVCKNCNAKNPKISKPTFGWFHTTGLSDSHARANVIRGYKLG
GERSDETEENPSPEVVNADEAEGDSFVDGTNVIEGSALKRHERNERERAPREFVKQKRFS
SRPLLPSEVRDIVKPLWENEAQLCSFICDIQHERFDKFRNRAGYSMFFMESVLVPPIKFR
PAAKAGDAVSEHPQTVLLGKVLQCNIALGNAYVNNSERSKIVSRWMDLQQSINVVFDSKT
ATGQGQRLLSSGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGVPPYFAV
RLTYPERVTSWNVANLRDAIINGPEIHPGATHYVDKLSTVKLPPNKKMRISMSRKLPSSR
GVVTQNGKNSDYEFEGKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHY
ANCNTYNADFDGDEMNVHLPQDEISRAEAYNIVNANHQYIVPTRGDTVRTLIQDHIVSAV
LLTMKDTFLSHNQFNQLLYGSGVFAAGCSSSIGKRCQKISTVDSEALVQPVLPAIWKPKP
LWTGKQVITALLNHLTRNCTPFTVEKDGKIPSSYFGSKADVQPSKDSRRDEDGEHMLLIR
KNELVHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSALSRLFTVFLQIHGFTCGVDDLL
ILPNHDKERKKELEGEDVGEEVHYDFFKFDQSTIGPMKLQLEIEKAIHNNGQSVVASLDL
KMKNRLHDKTSNLNKDLLVKGLLKPFPKNCISLMTISGAKGSTVNFQQISSCLGQQELEG
KRVPRMVSGKTLPCFPRWDFSARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTS
RSGYLQRCLIKNLECLKVCYDYTVRDADGSIVQFAYGEDGVDVHQTSFISQFKALMENHA
IIGQKYQHDLEFNNYIKELPEGLAKKAQNYIKELKGKKISLELKEPEDLLKLVRQKYISS
LAHSGEPVGVIAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTAAIDIMTPI
MTCPLLEGKFKTDAERLVRKVKKVTVADIIENMEVSVLPVSIDNRQISRIYKLKMKLFES
QVSSFEDYEETLEVLFLRELEDALESHLLLLSRISGIKNFIPEPRSTASQGTDEDASING
LQEDENDDGDGDDNDDERGDDLGTDAEKRKRQATDEMDYEDASEDEPSEGEVLDGLGKET
DQDGNEVEIAEDGEIEAVDVEDEAFKPKPRDKKTKSKSKKKKKVSAARKDYDRSIFVAAK
GLDFEVHFRFTNEPHILLGQIAQRTAKKVSLKSSGKIDMCQAVMSAKNDQVLWKPIDPKS
KDMKTSTPTMNYDDSKLEDDKARTPIAKNDDPKVKDDKAKTTEKDDPGRWALKTAGVDFY
AFWKMQDDLDISRIYTNNIHAVLSMYGVEAARETIIREVTHVFGSYGVEIDYRHLSLIAD
FMTHAGGYQPMSRHGSIAGSISPFLKMSFETASKFIVEAASHEMTDNLESPSARICLGLP
VKMGTGCFDLMQKLEI
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgcaactgagggtgtgtcggagagtgtggaggcggttcggttcagtttcatg
acagatgaggaggtcaggaggcacagtgttgtgaagattacaaaccccattttgcttgac
agtgttgtgagaccagtccctgcaggtctttatgatccagcaatggggccactagatgac
cattctccctgtaaatcatgtggtcaacggtcatttcattgcccaggccattgtggtcat
attgaccttgttacaccagtctacaatccgttgctgtttaatatgctccataatcttcta
caaagaacctgtttcttttgcttacattttcgagcaagcagaagtgaggttgaaaaacgt
gctgctcaattggaactcatagcaaagggtgacattgttcgggccaaaagtttagattca
atctcacctagtgaatcaatcgatccaggggatagcgatggtagccatgtatcctgttct
acagttcattctgctgcagagacttacaactctgagcattcgaatcaagggtggacctcg
gttcagtttatcgaagctatggctatcttgaataaatttctgaagccaagatccacggtg
tgcaaaaattgcaatgccaaaaatcctaagatcagcaaacctacttttggatggtttcat
acgactggtttatctgattcacacgctagagcaaatgtcattcggggttataagttggga
ggcgaacgcagtgatgaaactgaggagaatccttctcctgaggtagtaaatgctgatgaa
gctgaaggtgattcatttgtggatggcactaatgtaattgaaggttctgcgcttaaaagg
catgaaagaaatgaacgggagcgtgctcctcgtgagttcgttaagcagaagaggttctct
tcgaggcctcttttaccctctgaggttagagacatagtaaagccgctgtgggaaaatgag
gctcagctctgctcgtttatctgtgatattcagcatgaacgattcgataaatttaggaac
agagcgggttactctatgttctttatggagtccgttcttgtgcccccaatcaaattccgc
ccggctgccaaggctggtgatgctgtgtcagagcatccccaaactgttctactaggaaaa
gtactgcagtgcaatatagctttgggaaatgcttatgttaacaactctgaacgctcaaag
attgttagcaggtggatggatcttcaacagtctataaatgttgtctttgatagcaagact
gctacgggtcaaggtcaaaggttactttcttctggaatatgtcaattgttggagaaaaaa
gaggggatcttccgccagaaaatgatgggaaagagggttaattttgcatgccgatctgtt
atatctccagatccttatttggcagttaatgaaatcggggttcctccatattttgcagta
agattgacctatcccgagagagtgacttcttggaatgttgccaatttgagagatgctatt
attaatggccccgaaatccatccgggggctacccattatgttgataaattgtctactgtg
aaactgccaccaaacaagaaaatgcgtatttcaatgtcaaggaaattaccttcttccaga
ggggtggtaacacagaatgggaagaattctgactacgagtttgaaggcaaaattgtgtat
cgtcatttacgggatggagatattgtgctcgtcaataggcagcccacacttcacaagcca
agtattatggcacatgtggttcgcgtattgaaaggggagaaaactctacgtatgcactat
gcaaattgcaatacgtataacgctgattttgatggtgatgaaatgaatgttcatttacct
caagatgaaatttcgcgtgctgaagcttataatattgtcaatgctaatcatcaatatatt
gttccaacgaggggtgatactgtcagaaccttgatccaggatcatattgtaagtgctgtg
cttctcacaatgaaggatacatttctatcgcacaaccagttcaatcagctcctctatggt
tctggtgtgtttgctgctgggtgcagttcctctattggcaaacgttgccagaaaatttct
acagtagattctgaagctttggtgcagcctgttttacctgcaatatggaaaccaaagcca
ctttggactgggaagcaggtcattaccgcattgctaaaccatttgactagaaattgcaca
cctttcactgttgaaaaggatgggaaaatcccatcgtcttattttggcagcaaggctgat
gttcaacctagcaaagatagcagacgtgatgaagatggggagcatatgttgttaatccgg
aagaatgagctcgtgcatggtgtgattgacaaggctcagtttggcaagtatggtttggtt
catactgtgcaggagctctatggctcagacactgcaggcattttgctttctgctctcagc
cggttgtttactgtgtttttgcagattcacgggttcacttgtggagtggatgatcttctg
atattaccaaatcatgacaaagagagaaagaaggagcttgagggtgaagatgttggtgaa
gaagttcattatgatttctttaagtttgaccagagtacaataggccctatgaaactgcaa
cttgaaattgagaaagctatacacaataatggacagtctgtcgtagcatccttggatttg
aagatgaagaataggctccatgataagacttctaatctcaacaaagatttgttggttaaa
ggattattgaaaccctttccgaagaactgcatttctctcatgactattagtggggctaaa
ggtagtacggttaatttccaacaaatatcttcttgtctgggacaacaagagttagaaggc
aagcgagtaccccgaatggtttccggtaaaaccctaccctgctttccccgttgggatttt
tcagctcgagctggaggttttatttcggatcgcttcctttctggtcttcgtcctcaggaa
tattacttccactgtatggccggtcgtgaagggttggttgatacagcagtgaaaacatct
cgtagtggatacctgcaaaggtgcttgattaaaaatctggagtgcctgaaagtttgctac
gattatactgttcgtgatgcagatggttcaattgttcaatttgcctatggagaagatggt
gttgatgtacaccaaacgagctttatttctcaatttaaagcgctgatggagaatcatgca
attattggccaaaagtatcaacatgatcttgaatttaataattacattaaggagttgcct
gaaggccttgcaaagaaggcacaaaattacataaaggaattgaagggaaaaaaaatatct
ttagaactgaaggaaccagaggacttgcttaagttagtgaggcaaaagtacatatcgagt
cttgcacactcaggagaaccagttggtgtaattgctgctcaatctattggtgaaccatcg
acacagatgacgctaaacaccttccaccatgctgggcgtggagaaatgaatgtgacattg
ggaattccacgtttacaggagatcttgatgactgctgcaattgatattatgactcctata
atgacatgccctttgctagaggggaagttcaagactgatgctgagcgcctcgtaaggaaa
gtgaagaaggtaactgttgcagacattatagagaacatggaagttagtgttttaccagtt
tccattgataatcgtcagatatccagaatctataagcttaagatgaagctctttgaatct
caagtttcttcattcgaagactacgaggaaacactggaagttttgtttttgagagaacta
gaagatgcactagaaagtcatttacttttgctctcgagaattagtggcataaaaaatttc
ataccagaaccacggtcaacggcatcacaaggcacagatgaggatgcttctatcaacggg
ctacaagaggatgaaaatgatgatggtgatggtgatgacaatgatgatgaaaggggcgat
gatctaggtacggatgcagaaaaaagaaaacggcaagctactgatgagatggattacgag
gatgcttctgaagatgaacctagtgaaggggaggtattggatggacttggaaaagaaact
gatcaggatggaaacgaagtggagattgcggaggatggtgaaatcgaggcagttgatgtt
gaagatgaagcgttcaagcctaaaccacgggacaagaaaaccaaatcaaaatcgaaaaag
aagaagaaagtgagtgcagccagaaaggactatgataggtcaatctttgttgcagctaaa
ggactggactttgaggttcatttcaggttcaccaatgagcctcatattttactgggtcag
attgctcagaggacagccaagaaggtttctctgaagagctctgggaagattgacatgtgt
caagcggttatgtctgctaagaacgatcaagttctttggaagcccatcgatccgaaatcg
aaggacatgaaaaccagtactccaactatgaattatgacgattcaaaactggaggatgac
aaagccagaactccaattgcgaaaaatgatgatccgaaagtgaaggatgacaaagccaag
actacggaaaaagacgatcctgggcgttgggcgctgaagacggccggggttgatttctat
gccttttggaaaatgcaagacgaccttgacatttcacgtatatatacaaacaacatacac
gctgttctaagcatgtacggggtggaagccgcaagggaaacgatcataagggaggtgaca
catgtttttggtagttatggtgtggaaatcgattaccggcacctaagtctaattgccgat
ttcatgacccacgcgggtggataccaaccaatgagcaggcacggaagcatagccgggtca
atatcgcctttcttgaaaatgtctttcgaaactgcctccaagttcattgttgaggctgca
tctcatgaaatgacagataacttggaatccccgtctgcgaggatctgtctcggcttgcca
gtgaagatgggtactggctgttttgacctaatgcagaagctagagatctaa
DBGET
integrated database retrieval system
