Actinidia eriantha (wild kiwifruit): 130790226
Help
Entry
130790226 CDS
T09464
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130790226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130790226
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130790226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
NBCH_WD40
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD40_RFWD3
WD_LRWD1
Beta-prop_Nup120_160
Beta-prop_SCAP
eIF2A
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
130790226
NCBI-ProteinID:
XP_057507184
LinkDB
All DBs
Position
12:4528901..4537189
Genome browser
AA seq
593 aa
AA seq
DB search
MDVDEENSVSTSVTEPSAAVTDGQTRVAAIDPVLIQPVPIITPPVVPPIGPIVTPPIVPP
VATIITPPVVPPIAPIPAVPPSIPRPLAPLPVRPPLPRPPQAQNGEVRGSDSDSDQDDSG
PNRINAGSDYEVSEHSRQVRERQEKAMQELLMKRRAAALAVPTNDMSVRARLRRLGEPIT
LFGEREMERRDRLRMLMAKLDAEGQLERLMKAHEDEEAAASVTKEEDEEDIRYPFYTEGS
KALLKARLEIAKYSIPRAALRLQHARRKRDDPDEDLDAEIDWTLKQAGSLVLDCSEIGDD
RPLSGCSLSHDGKMLATCAISGVAKLWSMPQVKKVSNLKGHTDRATDVAFSPTDNCIATA
SADRTARLWNTEGSLLKKFDGHLDRLARIAFHPSGKYLGTTSYDKTWRLWDIDTGEELLL
QEGHSRSVYGLSFHHDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGY
HLATGSEDNTCRIWDLRKRKSLYIIPAHSNSISQVKFEPQDGYFLVTASFDTTAKVWSSR
DFKPVKTLSGHEARVTSLDVVGDGQYIATVSHDRTIKIWSSRDSIREAAMEID
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacgaggaaaattctgtttcaacttcagttacagaaccttcagccgcagtc
accgatggtcagactagagttgctgcaattgatcctgtcctgattcaaccagttccaata
attacacctccagttgtccctcccattggtccaatagttacacctccaattgtacctcct
gttgccactataattacaccccctgttgtacctcccatcgctccaatacctgcagttcct
ccctcaattccccgtccattggcacctctccctgtccgcccacctctccccaggccaccc
caggcacaaaacggtgaggtcaggggcagtgattcggactctgaccaagatgattcaggc
cccaatcggattaatgcaggttcagattatgaggtatcagaacatagtagacaggtgaga
gagaggcaagaaaaagccatgcaagaactactgatgaagcggcgtgctgccgcccttgca
gtgcctactaatgacatgtcagtacgggctcgtctccgccggctaggtgaacctataaca
ctttttggagaaagggaaatggaaagacgggaccgtttgcggatgcttatggcaaaactg
gatgctgaagggcaactagagaggttaatgaaagctcatgaggatgaggaggctgcagct
tccgtgacaaaggaggaagatgaagaagatattcgctacccattttatactgaagggtct
aaagcacttttaaaggcccgattagagattgctaagtattctattccaagggcagctttg
cgtctgcaacatgcaagaaggaaaagggatgacccagatgaagatctggacgcagagatt
gattggactttgaagcaagctgggagcttggtcttagattgcagtgaaataggagatgat
aggccactttcgggatgttccttgtcacatgatggaaagatgcttgccacctgcgctata
agtggagttgccaaattatggagcatgcctcaagtaaagaaggtttctaatttaaaaggt
cacacagatcgtgcaactgatgtggctttttctccaactgacaattgtatagcaactgca
tcggcagaccggactgcaaggttatggaatactgaagggtctctcctaaagaaatttgat
ggccatttggatcgtcttgcacgaatcgcctttcatccatcagggaagtacttgggaaca
actagttatgacaagacttggagattatgggatatagatactggtgaggagttgcttctc
caagaaggtcacagtaggagtgtgtatggactatcttttcaccatgatgggtctttagca
gcatcttgtggtctggatgcacttgctcgtgtgtgggaccttcgttctgggagaagcatt
cttgccttggaaggccatgttaagccggttctaggtatcagtttttctcccaatggttat
catttagcaaccggtagtgaagataatacctgtcgaatttgggacttaaggaaaagaaaa
tccttgtacataataccggcacactcgaattctatctctcaagtcaaatttgagcctcaa
gatggatactttttggtaactgcgtcattcgatacgactgctaaggtttggtcatcaaga
gattttaagcctgtcaagacgttgtccggtcatgaagcaagagttacatcattggatgta
gtaggagatggacagtatattgccactgtttcacatgatcggaccatcaaaatatggtca
agcagagacagcattagagaagcagccatggaaattgactag
DBGET
integrated database retrieval system
