Actinidia eriantha (wild kiwifruit): 130790412
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Entry
130790412 CDS
T09464
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04120
Ubiquitin mediated proteolysis
aew04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130790412
04120 Ubiquitin mediated proteolysis
130790412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130790412
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130790412
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130790412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-RING_16
FlxA
zf-HC5HC2H
Prok-RING_4
zf-C3HC4_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
130790412
NCBI-ProteinID:
XP_057507332
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All DBs
Position
2:627030..635805
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AA seq
549 aa
AA seq
DB search
MRLRTYAGFSLVATLAVIYHAFHTRGQFYPATVHLSTSKISLVLLLNMGLVIMCILWQLT
KRVFLGSLREAEVERLNEQSWREVMEILFSITIFRQDFSVTFLAMVTALLLIKALHWLAQ
KRVEYIETTPSVPTLSHIRIVAFMGFLLLLDSLFFYDSVKYLIQTRQASVSLFFSFEYMI
LATTIVSAFLKYVFYVSDMLMEGQWERKAIYTFHLELVRDLLHLSMYLCFFLVIFVNYGV
PLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTT
AKRLGCGHLFHVHCLRSWLERQHTCPTCRALVAPPENGANTSGSRADAPQQGTSTASSHS
QSSAGDGVANDTVSQHQARLKAAATAASIYERSFVYPSAKTLVWSPGYPQAYRPLAGTNS
VGSSREQSLDGHSQQHSFAIPGGPATLPFQFPQSDFVPFLAPVTDMNHGDRFGANPNAPD
SELEAREKHIQNQIEILRNQLQLVQKSIAETSMDTCATSFDGKGKAVASSSSCFLDCGSH
GETEGTEKR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaggttacggacgtatgcagggtttagtttggtagccaccctggcggttatttatcat
gcgtttcacacgagaggccagttttacccggcaacagtacatttatcgacatccaagatc
agtttggtgcttcttctcaacatgggtcttgtcattatgtgtattttgtggcaactgacc
aaacgggtcttccttggatctctccgggaagcagaggttgaaaggctgaatgagcagtca
tggcgggaagtcatggaaatacttttctcaatcaccattttccggcaagacttttcggtt
acatttctcgcaatggtaactgctcttttgctaattaaggctctgcactggttggctcaa
aagagggttgagtacatcgaaacaaccccatccgtccccacattgtctcacatccgaatc
gtagcatttatgggatttctccttcttttggacagtctcttcttctatgactctgtgaag
tatttgatacaaactcgacaggcatccgtttctcttttcttttcgtttgagtacatgata
cttgcgaccacaatagtgtcggcgtttttaaagtatgttttctacgtcagtgacatgctt
atggaaggacaatgggaaagaaaggcaatttacacctttcacttggaacttgttcgggac
ttgctgcacttatcgatgtatttgtgcttctttctcgtgatttttgtgaactatggtgtg
cctctgcacttgattagggagctctacgagacatttcgcaactttaaggttcgagttgct
gattacattcgttatcggaagatcacttcaaatatgaatgatcgttttccagatgcaaca
cctgaagagctcaatgcaagtgatgcaacctgcatcatttgtcgtgaggagatgacaaca
gccaagagacttggttgtgggcatctgtttcatgtgcactgcctccggtcttggttagag
agacagcacacgtgtcctacttgcagggcacttgttgcaccacctgaaaatggggctaat
acttctggatcacgggcagatgctcctcaacaaggtacaagcacagctagttcacattct
caaagttcagctggagatggtgtagcaaatgacactgttagccaacatcaggccagactc
aaagctgctgctactgctgcctcaatatacgagagatcttttgtttatccttccgcaaag
acattagtgtggtcccctggatatccccaagcatatagacctctggctggcactaatagc
gtgggatctagtagagaacaatctttggatggacactcacaacagcattcgtttgcaatc
cctggtgggcctgccaccttgccctttcagtttccccaatctgattttgtcccttttctt
gctcccgttacagacatgaaccatggagatagatttggcgccaatccaaatgcaccagac
tctgaattagaagcccgggaaaaacatattcagaaccagattgagatcttgcgaaatcag
ctccagcttgtacaaaagtcaatagctgagacaagcatggacacgtgtgcgacttctttt
gatggaaaaggaaaggcagttgcttcatcgtcttcgtgtttcttagattgcggttcacat
ggggagactgaagggacggagaagaggtaa
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