Actinidia eriantha (wild kiwifruit): 130790529
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Entry
130790529 CDS
T09464
Name
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1-like
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130790529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aew03009
]
130790529
03016 Transfer RNA biogenesis [BR:
aew03016
]
130790529
03029 Mitochondrial biogenesis [BR:
aew03029
]
130790529
Enzymes [BR:
aew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
130790529
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
130790529
Transfer RNA biogenesis [BR:
aew03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
130790529
Mitochondrial biogenesis [BR:
aew03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
130790529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Entericidin
Motif
Other DBs
NCBI-GeneID:
130790529
NCBI-ProteinID:
XP_057507483
LinkDB
All DBs
Position
13:complement(12911279..12948798)
Genome browser
AA seq
704 aa
AA seq
DB search
MKKHPPPAYTPNPIPFDRSSNSSVSVSVCLSTMGFFDLNIPYHESDKQTTDKSSRKATRL
KLTVKAMELGYTGVAYNRTIKGVMSESDRCTTALFSLSSVLKLVPSLSSAVRLHRSLLGV
PDSAPFRQYTRLTVAVDSSSQASALNSGNPILKTYDVVAVQPLNQNAFERACQDSEVDLI
AIDFSDKLPFRLKQPMVKAAIERGVYFEITYSGLIMNAQVRRQMISNAKLLVDWTRGKNL
VFSSAAPSVTELRGPNDVANLASLLGFPMERAKAALSKNCRSLIANALRKKHYYKEAIRV
EVISSGEERDSKDPCFIDWLKWDPISSGEGDLLLDDMARSFSASAKASKTVKPIDFASLA
YSFPSRGLQVRDIKSSAVAVMQPLGIGQDLSAAGETVLSIAVIGASQQPESLGDLPKEDQ
TSSYSMPSQHLKYSCDDSMKSSSPTDTLRDLSNAEETVMHTTISEEKSKNSNGFDVYFSH
PGTEMHNLQSQSCITRCNSHVMSPGHNAAFHTSAISTEIAAVACNALADTENLTSSEDIN
FSALQSEKSKRSSGSDGVSGTQDLAMEEVITETNTKTKEDLSSDAYDVSLHEDFTETEQL
RETRGDSVSVGDVFPVVQSCDDMKDSVGHLVANCQQPNEVAMKDQNQLEDHAETNHTALN
DSSGKVKVKQRTHNRAFLFPLKRLLNRTPFKRKAKMSKMKAKLL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaccctcctcctgcctacacaccaaaccctatacccttcgacagaagttca
aatagctctgtctctgtctctgtgtgtctctctacaatggggttcttcgacctgaacata
ccctaccacgaatccgacaagcaaaccaccgacaaatcttctagaaaagccactcgattg
aagctcacggtgaaggcaatggagctaggctacaccggagtcgcctacaaccgcacgatc
aagggcgtgatgtcggaatccgaccgctgcaccaccgctctcttctccctatcctccgtc
ctcaaactcgtcccttctctctcctccgccgtccgcctccaccgcagtctcctcggcgtc
ccggactcagcccccttccgccagtacactcggctgacggtcgccgtcgacagctcgtcc
caggcgtcggctctcaactcggggaatccgattctcaagacgtacgatgtggtcgcagtt
cagccgctgaatcagaacgcgttcgagcgggcgtgtcaggattctgaggtggatttgatt
gcgattgatttttctgataagcttccttttaggttgaagcaacctatggttaaagctgca
attgagcgtggtgtatatttcgagattacatactcaggtcttatcatgaatgctcaagtg
aggagacaaatgatctctaatgctaaactactggtggattggactcgaggaaagaatctc
gttttctcaagtgctgccccatctgtgactgaactaagagggccaaatgacgttgcaaat
ttagcatcactgcttgggttccctatggaacgtgctaaagcagccctttccaaaaattgt
agatctcttatcgctaatgctttaaggaaaaaacattattacaaggaggccatcagagtt
gaagtaatttcgtcaggggaagagcgtgactccaaggatccctgtttcattgactggctt
aaatgggatcccatttctagtggtgagggtgatttgctattagatgacatggcaaggtca
ttctctgcctcggctaaagcatccaaaactgtgaagcccattgactttgcttcacttgca
tatagttttccatcacgtgggttgcaagttcgggatataaaatcttcagcagtggctgta
atgcagccactgggtattggtcaagacttgtctgctgctggggaaaccgtgttatcaatt
gcagttataggagcatcgcaacagccagagagtcttggagatcttcctaaggaagatcag
acttcatcatacagcatgccatcacaacatctgaagtacagctgcgacgattctatgaag
tcatcttcaccaactgatactctgagagatctgagtaatgctgaggaaactgtaatgcat
accaccatcagtgaggaaaaatctaagaactcaaatggatttgatgtatatttttcccat
cctggaactgaaatgcataatttgcaatctcaaagttgcatcacgaggtgtaatagtcat
gttatgtcacctggtcacaatgcagcatttcacacatcagcaatatccactgagattgct
gctgttgcctgtaatgcgcttgctgatacagaaaatttgacatcctccgaggatattaat
ttttctgctttacagagtgaaaagtctaagaggtcaagtggttcggatggagtttcaggc
acacaagatcttgcaatggaagaagtcataactgagacaaatacaaaaactaaagaagac
ttatcatcagatgcatatgatgtgtctttgcatgaagattttacggagacagaacagctc
agggaaacaagaggtgattcagtttctgttggtgatgtatttccagttgtgcagtcttgt
gatgatatgaaagatagcgttggtcatcttgttgcaaattgccagcagccaaatgaggtg
gcaatgaaagatcaaaatcaacttgaagatcatgctgaaactaatcatacagccttgaat
gattcctcaggaaaggtcaaagtgaaacaaaggacgcataaccgagcctttttatttcct
ttgaagcgtttgttgaatcgtacacctttcaagaggaaagctaaaatgtctaaaatgaag
gctaaattgctgtaa
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