Actinidia eriantha (wild kiwifruit): 130790912
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Entry
130790912 CDS
T09464
Name
(RefSeq) pre-mRNA-processing factor 39-1-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130790912
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130790912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_2
TPR_MalT
TPR_11
UTP6_C
Motif
Other DBs
NCBI-GeneID:
130790912
NCBI-ProteinID:
XP_057507968
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All DBs
Position
13:8897754..8915503
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AA seq
842 aa
AA seq
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MGDSETVVAQTSAVMGYASAGYSSTNCSSISSSVASDAGAFADATVPRDLVASAAVADVA
NTVADGSDVGGEAYSTDSNSAIQGAHATMLYGSEPSYGVVDAVENIAGSTNISAGSSQVA
CADSSVNGNDVIEARDIILTGISENGNSSDNVHRSSFDHQLVDGSALSAEEERLWSIVGA
NSGDFNVWTALIEETEKMSEGNILKIRKVYDAFLAEFPLCYGYWKKYADHEARLGSIEKV
VEVYEQAVQGVTYSVDIWLHYCVFAINTYGDLETIRRLFERGLAYVGTDYLSFPLWDKYI
EYEYLQQDWSRLALIYTRILENPNQQLDRYFNSFKELAGSRPLSELTAEEAAAAAAAAVK
SESKDQEIEGEAHPTAIEQSPKPVSSGLTEAEELEKYIAIREEMFEKAKEFDSKIIDFET
AIRRPYFHVRPLNVAELENWHNYLDFIEGVDDFNKVVKLYERCLIACANYPEYWIRYVLC
MEACGSMDLANNALARATQVFVKRQPEIHLFAARFKEHSGEIPGARAAYQLVNTEIAPGL
LEAIIKHANMEYRLGNLEDACSVYEQAIVIEKGKEHSQSLPFLFAQYSRFLHLVSGNVEK
AREVLVQAHENVELTKPLLEALIHLESIQPPPKRIEYLDSLVEKFLVPSPDSLNIASVSE
REELSSIYLEFLDLFGDAKSIKKADDRHAKIFLHHKSTSESKKRSAEDYLISEKTKLAKS
YSNVPTTSPSVMGAYPNAQNQWAAGYGSQPQGWPQVAQSQGQQWNPGYAQQAAYGSYGSS
YAHPQIPTTVPQTAAYGAYPPTYPVQQAFPQQGYAQPATSAALNPAQQTASVPPQAYYGG
YY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtgaaactgtggttgctcagacatctgcagttatggggtacgcatctgct
ggctattcttccaccaattgcagtagcatcagctcaagtgttgcttctgatgctggtgcc
tttgctgacgcaacagttccgagagatttggttgcttctgctgctgtggcagatgttgcc
aatactgttgcggatggttctgatgtaggtggtgaagcatacagtacagattcaaactct
gccattcagggagctcatgctacaatgctttacggttctgagccatcttatggagttgtt
gatgctgtggaaaatattgcgggctctacaaacatttctgcaggttcatctcaagttgcc
tgcgctgattcttctgttaatggaaatgatgttatcgaagctagagatattattttgact
ggtataagtgagaatgggaattcttctgataatgttcacagatcttcttttgatcaccag
ctggtggatggttctgcattatctgctgaagaagaacgattatggagcattgtgggagct
aattctggagattttaatgtgtggactgccctaattgaagagacagagaagatgtcggag
ggaaatattttgaaaattcggaaagtttatgatgcctttttagcagaatttccattgtgt
tatggttattggaagaagtatgcagatcatgaagcacgcctaggctctattgaaaaagtt
gtggaagtgtacgaacaggcagttcaaggagtgacttattctgtggacatatggttgcac
tattgtgtatttgctataaacacatatggcgatctggagaccattcgaaggctttttgag
cgaggactagcatatgttggcacggactacctatctttcccactttgggataaatatatc
gagtatgaatacctgcagcaggactggtcccgtcttgccttgatctacacccgaatatta
gaaaatcctaatcaacaactggatcgctacttcaacagctttaaggaattagctggaagt
cggcctctgtccgagttgacagctgaggaagctgcagctgcagctgcagctgctgtgaaa
tcagaatctaaagatcaagaaattgagggagaggctcatcctactgctattgaacaatct
cctaaacctgtaagttcaggcttaacagaagctgaggagttggagaagtatatcgccatt
agagaagagatgtttgagaaggctaaagagttcgattctaaaatcattgattttgaaaca
gctatcaggagaccctactttcatgtgcgtcccctcaatgttgcagaacttgaaaattgg
cacaactaccttgattttattgaaggagtagacgactttaataaggttgtcaagttatat
gaaagatgcctaattgcttgcgcaaattatcccgagtattggattcggtatgttttgtgc
atggaagcttgtggaagcatggatcttgcaaataatgcacttgctcgcgccacccaagtc
tttgttaagagacaaccagagattcatctgtttgctgctcgatttaaagagcatagtggg
gaaattcctggagcacgggctgcatatcaacttgttaatactgaaattgctccgggtctt
ttagaggctattattaagcacgcgaacatggaatatcgcctggggaacctcgaagatgct
tgttctgtatatgaacaggccattgtcattgaaaaaggaaaagaacattcccaatctttg
cctttcttgtttgcacagtattcacggtttttacatctggtttctggcaatgtagaaaaa
gcccgggaagttctagttcaagcgcatgagaatgtcgagctgactaaaccacttttggag
gctttgatccacttggagtcaattcagccacctccaaaacgaattgaatatttagattca
ctggttgagaagttcctagttcctagtcctgatagcctgaacatcgcaagtgtctctgaa
agagaagagttatctagcatttatttggagtttctggatctttttggggatgcaaaatct
atcaagaaggctgatgatcgccatgccaagatcttcttacatcacaaaagcacatctgaa
tcgaaaaagcgtagtgcagaggattatctgatttcagaaaaaacaaagctagccaagtct
tattccaatgttcctacaacctctccatctgtaatgggtgcatatccaaatgcacagaat
caatgggccgcaggttatggctcacagcctcaaggttggccacaggttgcacaatctcaa
ggacaacagtggaaccccggctatgcccaacaggctgcatatggtagttatggaagcagc
tatgcacatccacaaatacctacaactgtgccccagactgctgcttatggtgcttatcct
cctacatatccagtccagcaggcttttccccaacaaggttatgctcaaccggcaacatca
gcggctttaaatccagcacagcaaactgcttcggttcctccccaggcctattatggaggt
tactactga
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