Actinidia eriantha (wild kiwifruit): 130791345
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Entry
130791345 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC130791345
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130791345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130791345
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130791345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_12
TPR_10
TPR_8
ARM_TT21
ARM_TT21_N
TPR_19
TPR_17
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
130791345
NCBI-ProteinID:
XP_057508469
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Position
13:6281957..6296794
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AA seq
861 aa
AA seq
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MDSKDSSSSSSSSMAGSRDAAEDGVSSGAAGLAKDASVAFHSGKFAECVDLLNQLLQKKE
TDPKVLHNIAVGRYFQDGCSDPRKLLEVLNNVKEQSDELAHASGEHAEAVNNLGSKAVLG
PKGTNNAAHQFSNADSLHIVYGDEFDTSVTMLNIAVIWFHLHEYAKAYSILDSLYQTIEP
IDEATALHICLLFLDVALALHDPSKFVDVINYVEKAYCASNLISQSDSGSSAQQQSANLV
TKSSSFPSNSTATDASXTDSIGSVNASESPLSRTLSEENLETLISTIDMSGQNLARPSGL
QSANDLSRTPADHSISTSDLRLKLQLYKVRFLLLTRNLKAAKREVKTAMSMNVARGKDSS
MALLLKSELEYARGNYRKAIKLLMASTNRTETGIASIYYNNLGCIYHRLGKYHTSTVFFS
KALTNSSSLRKEKPLKLATFSQDKSLQIVYNCGVQYLACGKPILAARCFHKASLIFYNKP
LLWLRIAECCLMALEKGLLKPSGAHSDRSEVKVHVIGKGKWRQLALEDGISGNRQVNFVE
KDDWFLGDDKQPNLSMSLARQSLFNGLYLLNCSETKYLKSGLPHSSILEDNESREVGSLK
NANSKIISGGDSKASNVMVGSDQIITNGDVKEQKGGNIPNPTLQSSILDYEDIRRRENQM
IKQALLADLAYVELELGNPLKALSAARSVLELPECSRIYIYLCNVYSAESLCLLNRPKEA
AHHLLAYLSGGSNVEFPFSEEDHEQLQVPKILDSEELNGGLLNPKNSSIEESQAVVFLKP
EEARGTLYGNLAAFFAVQGDLEQARRFVVQALSTIPNSPEANLTAIYLDLVAGKTQEALS
KLKHCSRIRFVPGSLTLKGSS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaaagattcgtcgtcatcttcatcgtcttcaatggccggcagcagagatgct
gcggaggacggtgtttcgtcgggcgctgcggggcttgcgaaggacgcgagtgtggcattt
cactcggggaagttcgcggagtgcgtcgatttgttgaatcagctcttgcagaagaaagaa
accgaccccaaggttcttcacaatattgctgttggaaggtactttcaggatggttgttca
gatcccaggaaattattagaagtactcaataacgtcaaggaacaaagtgatgagcttgct
catgcatccggagaacatgcagaggctgttaacaacctgggcagtaaagctgtattagga
cccaaaggaactaataatgcggcccatcaattctctaatgctgatagtttgcatattgtt
tatggtgatgaattcgacacttccgtgacgatgttaaatatagcagtgatctggttccat
cttcatgaatatgcgaaggcgtattcaattctggattctttatatcaaacgattgaacca
atagatgaggctacagctcttcatatttgccttctattcctggatgttgcattagctttg
catgatccatcgaaatttgttgatgtaattaattatgtggaaaaagcttattgtgccagt
aatttgatcagtcaaagtgacagtggaagctctgcacaacaacaatctgccaacttagtg
acaaaatcttcgtcatttccgagtaattcaacagccaccgatgcttctnatactgattca
attggtagtgtgaatgcctcagaaagtcctctatctagaactttatcagaggagaatctc
gaaaccctaatttcaacaattgatatgagtggacagaacttggcaagaccatctggcctc
caatcggcaaatgatctttcaaggaccccagctgatcattccatttcgactagcgatttg
agacttaagttgcagctttacaaggttcggtttctgctccttactaggaacctcaaggca
gcgaaacgtgaagttaagacagctatgtctatgaatgtagcgcgaggtaaagattcttcc
atggctctcctcttgaagtccgagctagagtatgctcgtgggaactaccgcaaagccatc
aagctcttgatggcttcaactaatcgaacggaaacagggattgcaagcatatattacaac
aatctggggtgcatctaccatcgacttggaaaatatcacacatcgactgtattcttttcc
aaggctctgactaattcttcatccctccggaaggaaaagcctttaaagcttgcaactttc
tcgcaggacaaatctctccaaattgtgtataattgtggagtgcagtacttggcttgtggg
aaaccaatactagctgctcggtgtttccacaaggctagtttaattttctacaacaagcct
ctcctgtggctccgaattgccgaatgctgtctaatggcactggagaagggacttctgaaa
cccagcggcgctcactctgatagatcagaggttaaagttcacgtcattggtaagggaaaa
tggagacaacttgctttggaagatgggatttcaggtaacaggcaggtgaattttgttgaa
aaagatgattggtttttgggtgatgataaacaaccgaatctctcgatgtcccttgcccga
cagtctctgtttaatggcctgtacttattgaactgttcagagacaaaatatttgaagtct
ggcttgcctcatagttcgatcttggaggacaatgaatcaagagaggtgggatcattaaaa
aatgctaattccaagatcatatccggtggtgattccaaggcatcaaatgtgatggtgggc
tcggatcaaattatcacaaacggggatgttaaagaacaaaagggcggaaatattcctaat
cccaccttacagagctccatattggattacgaagacattcgtcggagagagaatcagatg
attaagcaagcccttcttgctgacttggcatatgtagagttagaattagggaaccctttg
aaggccctgtcagccgcaaggtctgtcttagaacttccagaatgctccagaatatacatt
tatctctgcaatgtatactcagccgagtctctctgcctcctaaaccggccaaaggaagct
gcccaccatttgttggcctatttgtctggcggaagcaatgttgaatttcccttcagcgaa
gaggaccatgaacaattgcaagttccaaaaattttggattccgaggaattgaatgggggg
ctattgaatcccaagaactcttcaattgaggaatcacaagcagttgtgttcctcaagccc
gaagaggcacgcggaacgctttatggaaacctagccgctttctttgctgtgcagggagat
cttgagcaggctcgccggtttgtagtccaagctttgtcgacgataccaaatagtcccgaa
gcaaatctcactgcgatctatttggatctcgtggccgggaagacacaagaagctctctcc
aagttgaagcattgttctcgtattagatttgtccccggaagtttaacgctaaaaggttct
tcttga
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