Actinidia eriantha (wild kiwifruit): 130791584
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Entry
130791584 CDS
T09464
Name
(RefSeq) ubiquitin receptor RAD23c-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03420
Nucleotide excision repair
aew04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130791584
09124 Replication and repair
03420 Nucleotide excision repair
130791584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aew03051
]
130791584
03400 DNA repair and recombination proteins [BR:
aew03400
]
130791584
Proteasome [BR:
aew03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
130791584
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
130791584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Dsc3_N
Rad60-SLD_2
CUE
UBA_RAD5A
TECR_N
Ubiquitin_5
UBA_3
Crinkler
NQRA_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
130791584
NCBI-ProteinID:
XP_057508756
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Position
13:complement(747824..759605)
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AA seq
386 aa
AA seq
DB search
MRIFVKTLKGTHFEIEVKPEDTVADVKQNIESVKGADVYPAPQLMLIHQGKVLKDGTTLE
ENKVAENSSVVIMLTKNKSSSGEGSATSTAPTAETPQTNSPPSTTATQAPAVTSSPPASV
PSPAPVAAPVSLVTAGSESDVYGQAASNLVAGSNLEGAIQQILDMGGGTWDRETVVRALR
AAYNNPERAVDYLYSGIPEQAEVPAVARAPASGLAANSPVQPPQPVQPEPIASSGPNANP
LDLFPQGLPNMGSNVAGAGTLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPQLVR
LIQEHQADFLQLINEPGEGGEGNILGELAAGMPQAVTVTAEEREAIERLEAMGFDRAIVL
EVFFACNKNEELAANYLLDHMHEFEE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaggattttcgtcaagactttgaagggcacccacttcgaaatcgaagtaaaacccgag
gatacggttgctgatgtcaagcaaaacatagaatctgttaaaggagcagatgtgtatcct
gctccacaactgatgcttattcatcaaggaaaagttctaaaagatggcacaacactggaa
gaaaacaaggttgctgaaaatagttctgtagtgatcatgttaactaagaataagagctca
tctggtgaaggttcagccacatcgactgcacctacagctgagacaccacagacaaactcc
ccaccttctactacagccactcaagctcctgcagtaacctcatcaccgcctgcatctgtt
ccctcgcctgcacctgttgcagctcctgtctctttagttactgctgggtcagagtctgat
gtatatgggcaagcagcgtcgaatctggttgctggtagtaaccttgagggagctatccag
caaatacttgacatgggtggagggacttgggatagggaaactgttgttcgtgctcttagg
gctgcctacaataacccagagagagctgttgattatttatattctggtatccctgagcaa
gccgaagttccagctgtggcccgagcccctgcgagtgggctggctgcaaactctccagtt
cagcctccacaaccagtgcaaccagaacctattgcttcaagtggacccaacgctaatcct
ttggatctcttcccgcagggcctgccaaacatgggttcaaatgttgctggtgcaggaacc
ctggattttctacgcaatagtccacagttccaagccttgcgagctatggtgcaggctaat
ccacaaatcttacagcccatgcttcaggagctagggaagcaaaatcctcagttggtgcgg
cttattcaggagcaccaggccgatttccttcagctgatcaatgaacctggggaaggtgga
gaagggaacatactgggggaactagccgcaggaatgccacaggctgttacggttacagct
gaggagcgtgaagccatagagcggcttgaagcaatgggttttgatcgggcaattgtactg
gaggtgttctttgcttgcaacaagaatgaggagctggctgctaactaccttttggaccac
atgcatgaatttgaagagtaa
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