Actinidia eriantha (wild kiwifruit): 130791720
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Entry
130791720 CDS
T09464
Name
(RefSeq) general negative regulator of transcription subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130791720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130791720
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130791720
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130791720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
130791720
NCBI-ProteinID:
XP_057508966
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All DBs
Position
13:4555870..4579831
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AA seq
903 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSEARDWLNNVVGELESQIDNFEAEIEGLSVRKGKTRPPRLTHLEASISRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVIIGPALVKGVGTTTPALGIKTSSALSPTQQPVTVTPFQQGAPIQEQVEETASQDN
NSDTIARTPQPKNSTIVSSAPSTPAENHATPVAVNASTHNLSVAPTASTILSGSSSVRVA
LENAGSALSSSPLNISNSSKEEDTTSFPGRKSSPALAETGLRGIGRGGLTSQPSTTIPLP
SGIANPSNGGLSAASSASEMIKRNIAGPDERLGGSGVVQPLVSPLSNRMILPQAAKANDG
TGPADGGNIGEGGVMSGRVFSPSAVPGMQWMPGSPFQNQSEVGQFRGRTEIAPDQREKFL
QRLQQVQQQGPSNILGMAPLGGGQNPKQFSAQQQNPLLQQFNSQSLSVSPQAGLGLGVQA
SGLTTSASTSQQQPTAIHQQSAQQALISTGTKEAGEVGHAKIEDMQQQQNLSDDSTTEPA
SSTGFGKNLINDDDLKASIAPDAPAGVSGSSTEPAQVPRDIDLSPGQPLQSNQPSGSLGV
IGRRSVSDLGTIGDNLGGSSANSGGMRDQSYSMQMLEAAYYKLPHPKDSERAKSYIPRHP
AVTPPSYPQGQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWR
YHRKYSTWFQRHEEPKVTTDEYEQGSYIYFDFHTSDEMQRGWCQRIKPDFMFEYNYLEDE
LIV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggagctagtcgaaagctacagggcgagattgatcgggttcttaagaaagttcaagaa
ggggtcgacgtgtttgacagtatctggaacaaggtttatgacacggacaatgcgaatcag
aaggagaagttcgaggccgacttgaagaaggagatcaagaaactccagagatatcgagac
caaatcaaaacatggatccagtccagcgagatcaaggataagaaggttagtgcctcttat
gagcaggccctgatggatgctcgtaagcaaatcgagcgtgaaatggaaagatttaagata
tgtgaaaaggaaactaagacaaaagccttttcaaaggaaggcctgggccaacaacctaaa
acggatccaaaggaaaaggctaaatcagaagcaagagattggttgaacaatgtggtgggg
gagttggaatcgcaaattgataactttgaagctgagatagagggactttctgttaggaaa
gggaaaacgaggccgcccagattgacacatttagaagcttctatttcccgtcacaaggct
catataatgaagttagaattgattttgaggctcttggataacgatgaattgagtccagag
caggtcaatgatgttaaggatttcttggacgactatgtggagcgcaatcaggaggacttt
gacgaatttagtgatgtcgatgaactttacagctctttgccattagataaggtggagtct
cttgaagatctagttataattggtcctgctcttgttaagggtgttggtaccaccactcca
gctttaggcattaaaacttcttcggcgctatcccccactcaacagccggtcacagtgaca
ccttttcaacagggtgctcccatccaagagcaagttgaggagacagcttcccaggacaat
aattctgatactattgcacggactccacaacctaaaaatagtacaattgtttcttctgct
ccatcaacaccagcagagaaccatgcaactcctgttgctgttaacgcttcaactcataat
ttgtctgttgcaccaactgcttcgacaatcctttcaggttcaagttccgttcgagttgcc
ttggaaaatgcaggctctgctctgtcctcatctccgttaaatatatctaattcttccaag
gaggaagataccacaagcttccctggccgtaaatcatctccagctcttgctgagactggt
ctaaggggaatcggtagaggtggcctaaccagccaaccatctactactatccctctacct
tctggcattgcaaatcctagcaatggaggtctcagtgctgcttcttcagcctctgaaatg
ataaagagaaatatagcgggaccagatgagagacttgggggtagtggtgttgtgcagcct
ttggtttccccactaagtaatagaatgatcttgccacaggctgctaaggctaacgatgga
actggcccagctgatggtggcaatattggtgagggtggagttatgtctggcagggtcttc
tccccctctgcagttcctggtatgcagtggatgcctggaagcccctttcagaaccagagt
gaagtgggacaattccgtggaagaactgaaattgctcctgatcaaagagagaagtttttg
cagcgattacagcaggtgcagcaacaaggtccgagtaatattcttggcatggctcctctt
ggtgggggacaaaatccaaagcagttttctgcacaacaacaaaacccactcttacagcag
ttcaattcccaaagcttatctgtctcgcctcaagctgggttgggacttggagtccaagca
tcaggtcttaccactagtgcatcgacctcacagcagcagccaactgcaatccatcaacag
tctgctcagcaggcattgatatcaacaggaacaaaagaggctggggaagttggtcatgca
aaaattgaggacatgcagcaacagcagaatctatctgatgattcaaccacagaacctgct
tcaagtactgggtttggcaagaatctcattaatgatgatgatttgaaagcttctattgca
ccagatgcacctgccggagtatctggctcttcaacagagcctgcccaagtgccaagggat
attgatctttctcctggacaacctttgcaatccaatcagccctctggcagccttggtgtt
ataggtcgtagaagcgtttcggaccttggcacaattggtgataatcttggtggatcatct
gcaaattctgggggaatgcgtgaccaatcatacagtatgcagatgcttgaggctgcttat
tacaaactccctcatcccaaagactctgaacgtgcaaagagctacataccaaggcatcct
gcagtgactcctcctagctatcctcaaggacaggcacccattgtcaataatcctgctttc
tgggaaagactaggagctgataattatggcactgataccttattttttgcattttactat
caacagaatacttatcagcaatatttggctgctaaagagttgaagaaacaatcatggcga
taccataggaaatacagcacatggtttcaacggcacgaggagcctaaagtcaccactgat
gagtatgaacagggttcatatatatactttgatttccatacaagtgatgagatgcaacgc
ggatggtgccaaagaatcaagcctgatttcatgttcgagtacaactatcttgaagacgaa
cttattgtatag
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